RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ZNF585BQ52M93 769 aa11.49□□□□□ -0.57
COL4A1-201ENST00000375820 LSM4Q9Y4Z0 139 aaKnown RBP11.49□□□□□ -0.57
COL4A1-201ENST00000375820 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 GZMBP10144 247 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 ATP5LO75964 103 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 APC2O95996 2303 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 CA7P43166 264 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 VCX2Q9H322 139 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 SERF1AO75920 110 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 C1QL4Q86Z23 238 aa11.48□□□□□ -0.57
COL4A1-201ENST00000375820 OSR1Q8TAX0 266 aaPredicted RBP11.48□□□□□ -0.57
COL4A1-201ENST00000375820 CASP8AP2Q9UKL3 1982 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 NHSL1Q5SYE7 1610 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 TMEM219Q86XT9 240 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 ORMDL3Q8N138 153 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
COL4A1-201ENST00000375820 LAIR2Q6ISS4 152 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 ST20Q9HBF5 79 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
COL4A1-201ENST00000375820 MTCL1Q9Y4B5 1905 aaKnown RBP11.47□□□□□ -0.57
COL4A1-201ENST00000375820 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-201ENST00000375820 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 COQ2Q96H96 371 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 GDF15Q99988 308 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 MESP1Q9BRJ9 268 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
COL4A1-201ENST00000375820 NIT1Q86X76 327 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 A0A1W2PR77 199 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 IGHV3-53P01767 116 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 CD28P10747 220 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 OR10W1Q8NGF6 305 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 FAM57AQ8TBR7 257 aa11.46□□□□□ -0.57
COL4A1-201ENST00000375820 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 TRAV40A0A0B4J280 105 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 CRPP02741 224 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 TDGF1P3P51864 188 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 ZIC4Q8N9L1 334 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 CLDN16Q9Y5I7 305 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 RHOGP84095 191 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 NEUROG1Q92886 237 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 VGLL1Q99990 258 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 NAA38Q9BRA0 125 aaKnown RBP11.46□□□□□ -0.58
COL4A1-201ENST00000375820 LAMB2P55268 1798 aa11.46□□□□□ -0.58
COL4A1-201ENST00000375820 NBR2O15453 112 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 SLC25A20O43772 301 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 DMRTC2Q8IXT2 367 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-201ENST00000375820 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-201ENST00000375820 ASCL2Q99929 193 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 CHCHD5Q9BSY4 110 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 HBDP02042 147 aa11.45□□□□□ -0.58
COL4A1-201ENST00000375820 NEU4Q8WWR8 484 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-201ENST00000375820 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 TM4SF5O14894 197 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 FOXL1Q12952 345 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 KLRD1Q13241 179 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 COL11A1P12107 1806 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 VENTXO95231 258 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 RPL15P61313 204 aaKnown RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 RPL23P62829 140 aaKnown RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 OR9G4Q8NGQ1 327 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 NRN1Q9NPD7 142 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 CKS1BP61024 79 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-201ENST00000375820 ATAD5Q96QE3 1844 aa11.44□□□□□ -0.58
COL4A1-201ENST00000375820 CD8AP01732 235 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 LINC00158P58513 81 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 GSN-AS1Q9NRJ2 163 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 PHLDA1Q8WV24 401 aaPredicted RBP11.43□□□□□ -0.58
COL4A1-201ENST00000375820 TM2D1Q9BX74 207 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 LYZL4Q96KX0 146 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 SLC25A15Q9Y619 301 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 DLEC1Q9Y238 1755 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 SRSF7Q16629 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL4A1-201ENST00000375820 FAM181AQ8N9Y4 354 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 PAX1P15863 534 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 C1QTNF5Q9BXJ0 243 aa11.43□□□□□ -0.58
COL4A1-201ENST00000375820 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 426.3 ms