RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CT45A7P0DMV0 189 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 CCL3L1P16619 93 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 Q8N7P7 452 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 NEIL1Q96FI4 390 aaPredicted RBP11.41□□□□□ -0.58
MSH5-202ENST00000375740 FBXL7Q9UJT9 491 aa11.41□□□□□ -0.58
MSH5-202ENST00000375740 ROS1P08922 2347 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 ATP5G3P48201 142 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 TPPP2P59282 170 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
MSH5-202ENST00000375740 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 Q8N976 141 aa11.4□□□□□ -0.58
MSH5-202ENST00000375740 C11orf94C9JXX5 98 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.59
MSH5-202ENST00000375740 NDUFB4O95168 129 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 OR5G3P0C626 314 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 MYOD1P15172 320 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 TMPRSS3P57727 454 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 SELENOTP62341 195 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 GAL3ST2Q9H3Q3 398 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.59
MSH5-202ENST00000375740 TRBV20OR9-2A0A075B6H5 130 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 HSPE1P61604 102 aaKnown RBP11.39□□□□□ -0.59
MSH5-202ENST00000375740 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
MSH5-202ENST00000375740 TMEM204Q9BSN7 226 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 DYNLRB1Q9NP97 96 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
MSH5-202ENST00000375740 COL8A2P25067 703 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 KRTDAPP60985 99 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
MSH5-202ENST00000375740 NDUFB3O43676 98 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 VENTXO95231 258 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 FOXL1Q12952 345 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 POU2AF1Q16633 256 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 GCSAMLQ5JQS6 135 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 UNQ5815/PRO19632Q6UWF5 114 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 TREML4Q6UXN2 200 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 RAXQ9Y2V3 346 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 CEP295Q9C0D2 2601 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 PTPRQQ9UMZ3 2332 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 LOC105371242A0A075B767 164 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 SRRM4A7MD48 611 aaKnown RBP11.38□□□□□ -0.59
MSH5-202ENST00000375740 CRISP2P16562 243 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 CTRLP40313 264 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
MSH5-202ENST00000375740 PAFAH1B2P68402 229 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 BTF3L4Q96K17 158 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
MSH5-202ENST00000375740 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
MSH5-202ENST00000375740 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 LINC01560Q8TB33 94 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 CTSZQ9UBR2 303 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.37□□□□□ -0.59
MSH5-202ENST00000375740 PLAUP00749 431 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 CD3EP07766 207 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
MSH5-202ENST00000375740 LRRC10Q5BKY1 277 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 ZNF833PQ6ZTB9 187 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 SFRP2Q96HF1 295 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
MSH5-202ENST00000375740 SLC17A3O00476 420 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 UPK2O00526 184 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 MPDU1O75352 247 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 HYPMO75409 117 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 CA2P00918 260 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
MSH5-202ENST00000375740 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 MGST2Q99735 147 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
MSH5-202ENST00000375740 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 SMG1Q96Q15 3661 aaKnown RBP11.36□□□□□ -0.59
MSH5-202ENST00000375740 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 NPY1RP25929 384 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
MSH5-202ENST00000375740 NHLH1Q02575 133 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 Q6ZN92 141 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 MRPL20Q9BYC9 149 aaKnown RBP11.36□□□□□ -0.59
MSH5-202ENST00000375740 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
MSH5-202ENST00000375740 FAM90A27PA6NNH2 459 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 J3QR06 171 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 OPRK1P41145 380 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 CDKN1BP46527 198 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 HLA-DRB5Q30154 266 aa11.35□□□□□ -0.59
MSH5-202ENST00000375740 ERASQ7Z444 233 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms