RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TAAR2Q9P1P5 351 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 NUP210LQ5VU65 1888 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 GON4LQ3T8J9 2241 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 TRAV5A0A0B4J249 113 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 A6NIN4 97 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 TMEM250H0YL14 139 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 SNCGO76070 127 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 VDAC1P21796 283 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 RND3P61587 244 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 FHL5Q5TD97 284 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 PQLC2Q6ZP29 291 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 STARD5Q9NSY2 213 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 CRXO43186 299 aaPredicted RBP6.45□□□□□ -1.38
USP48-203ENST00000374732 NEURL1O76050 574 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 APOMO95445 188 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 NTN1O95631 604 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 FOXF1Q12946 379 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 CST6Q15828 149 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 OR10J6PQ8NGY7 276 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 ELSPBP1Q96BH3 223 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 AGMATQ9BSE5 352 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 APOOQ9BUR5 198 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 NINQ8N4C6 2090 aa6.45□□□□□ -1.38
USP48-203ENST00000374732 SLC2A10O95528 541 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 CECR9P0C854 216 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 FAM201AQ5SY85 155 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 VGLL1Q99990 258 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 EMC6Q9BV81 110 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 SCRT1Q9BWW7 348 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 PBOV1Q9GZY1 135 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 RPRMQ9NS64 109 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 TLCD2A6NGC4 264 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 DPM2O94777 84 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 NDUFB6O95139 128 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 PSMB3P49720 205 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
USP48-203ENST00000374732 RPS21P63220 83 aaKnown RBP6.44□□□□□ -1.38
USP48-203ENST00000374732 PRDX1Q06830 199 aaKnown RBP6.44□□□□□ -1.38
USP48-203ENST00000374732 IGFBP7Q16270 282 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 Q499Y3 187 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 OR10G2Q8NGC3 310 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 OTOSQ8NHW6 89 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 APOBEC4Q8WW27 367 aaKnown RBP6.44□□□□□ -1.38
USP48-203ENST00000374732 TAC3Q9UHF0 121 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 VSIG4Q9Y279 399 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 U3KQE9 123 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 NCBP2LA6PVI3 153 aaKnown RBP6.44□□□□□ -1.38
USP48-203ENST00000374732 DEDDO75618 318 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 OPRK1P41145 380 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 ATP5G3P48201 142 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 FUT5Q11128 374 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 ACP7Q6ZNF0 438 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 SFTPA1Q8IWL2 248 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 SCGB1C1Q8TD33 95 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 ZNF503Q96F45 646 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 BORCS8Q96FH0 119 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 OTORQ9NRC9 128 aa6.44□□□□□ -1.38
USP48-203ENST00000374732 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 DPRXA6NFQ7 191 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 AVPP01185 164 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 LINC00869P0C866 280 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 IL9P15248 144 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 RPS4Y1P22090 263 aaKnown RBP6.43□□□□□ -1.38
USP48-203ENST00000374732 PRSS3P35030 304 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 LOXL3P58215 753 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 PPP1CBP62140 327 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 RSPO4Q2I0M5 234 aaPredicted RBP6.43□□□□□ -1.38
USP48-203ENST00000374732 CEACAM16Q2WEN9 425 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 OR4C11Q6IEV9 310 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 Q6Q795 121 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 PAQR4Q8N4S7 273 aaPredicted RBP6.43□□□□□ -1.38
USP48-203ENST00000374732 CHST6Q9GZX3 395 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 DSPPQ9NZW4 1301 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 LY6LH3BQJ8 138 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 M0R1B8 84 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 ARL6IP5O75915 188 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 SMIM11AP58511 58 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 ZNF90Q03938 601 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 MSMO1Q15800 293 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 IER5LQ5T953 404 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 LINC01555Q8NAE3 123 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 OR2A1Q8NGT9 310 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 PIFOQ8TCI5 191 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 CST11Q9H112 138 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 Q9H8V8 135 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 BCL2L10Q9HD36 194 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 TMEM242Q9NWH2 141 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 SIT1Q9Y3P8 196 aa6.43□□□□□ -1.38
USP48-203ENST00000374732 TRAV9-2A0A087WT02 112 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 TRAV4A0A0B4J268 109 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 CHEK1O14757 476 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 IGKV1D-16P01601 117 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 AQP1P29972 269 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 TAS2R45P59539 299 aa6.42□□□□□ -1.38
USP48-203ENST00000374732 MLF2Q15773 248 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms