RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 SPTBP11277 2137 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 GLRXP35754 106 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 FMC1Q96HJ9 113 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
TRAF1-201ENST00000373887 MDC1Q14676 2089 aaKnown RBP12.04□□□□□ -0.48
TRAF1-201ENST00000373887 TRBV5-7A0A0A0MS05 114 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 MIR17HGQ75NE6 70 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 CD7P09564 240 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 CA7P43166 264 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
TRAF1-201ENST00000373887 CD24P25063 80 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 VKORC1Q9BQB6 163 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
TRAF1-201ENST00000373887 C1orf100Q5SVJ3 147 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
TRAF1-201ENST00000373887 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 Q9H3A6 140 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 PTPRFP10586 1907 aa12.03□□□□□ -0.48
TRAF1-201ENST00000373887 PIN1P1O15428 100 aa12.02□□□□□ -0.48
TRAF1-201ENST00000373887 EVI2AP22794 236 aa12.02□□□□□ -0.48
TRAF1-201ENST00000373887 GATAD1Q8WUU5 269 aa12.02□□□□□ -0.48
TRAF1-201ENST00000373887 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.48
TRAF1-201ENST00000373887 GPX4P36969 197 aaPredicted RBP12.02□□□□□ -0.49
TRAF1-201ENST00000373887 ZP1P60852 638 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 OR52E5Q8NH55 327 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 RNASE6Q93091 150 aaKnown RBP12.02□□□□□ -0.49
TRAF1-201ENST00000373887 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 LHX2P50458 406 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 CFHR1Q03591 330 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 ARPC1AQ92747 370 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 VCX2Q9H322 139 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 ARID1AO14497 2285 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 STHQ8IWL8 128 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.49
TRAF1-201ENST00000373887 IGHMP01871 453 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 LRTM2Q8N967 370 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 COX5BP10606 129 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 A0A0G2JMZ2 1700 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF646O15015 1829 aaPredicted RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF415Q09FC8 603 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 FOXF2Q12947 444 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 CRIPAKQ8N1N5 446 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 CHD5Q8TDI0 1954 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 PPIFP30405 207 aaKnown RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 RNASE7Q9H1E1 156 aaKnown RBP12.01□□□□□ -0.49
TRAF1-201ENST00000373887 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 COL4A6Q14031 1691 aa12.01□□□□□ -0.49
TRAF1-201ENST00000373887 C17orf98A8MV24 154 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 HIGD1CA8MV81 97 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 GP6Q9HCN6 339 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 THADAQ6YHU6 1953 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 ST20Q9HBF5 79 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 NPDC1Q9NQX5 325 aaPredicted RBP12□□□□□ -0.49
TRAF1-201ENST00000373887 CRPP02741 224 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 RTN4RL2Q86UN3 420 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 GREB1LQ9C091 1923 aaPredicted RBP12□□□□□ -0.49
TRAF1-201ENST00000373887 ADMP35318 185 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 EFNB1P98172 346 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 PSG7Q13046 419 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 VENTXO95231 258 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
TRAF1-201ENST00000373887 VGLL1Q99990 258 aa12□□□□□ -0.49
TRAF1-201ENST00000373887 HBDP02042 147 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 PSMG3Q9BT73 122 aaPredicted RBP11.99□□□□□ -0.49
TRAF1-201ENST00000373887 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
TRAF1-201ENST00000373887 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 ZDBF2Q9HCK1 2354 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 RP1P56715 2156 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 IZUMO1RA6ND01 250 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 IFITM2Q01629 132 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 ZNF585BQ52M93 769 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 RNF182Q8N6D2 247 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 CD8AP01732 235 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 SRD5A1P18405 259 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 LDLRAD2Q5SZI1 272 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
TRAF1-201ENST00000373887 HIST1H4AP62805 103 aaKnown RBP11.99□□□□□ -0.49
TRAF1-201ENST00000373887 HOXA3O43365 443 aaPredicted RBP11.98□□□□□ -0.49
TRAF1-201ENST00000373887 CD28P10747 220 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 C5orf30Q96GV9 206 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 COQ2Q96H96 371 aa11.98□□□□□ -0.49
TRAF1-201ENST00000373887 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms