RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 A0A1B0GV50 99 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 C22orf46C9J442 243 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 PPP5D1E7EU14 171 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 AP4M1O00189 453 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 NDUFA3O95167 84 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 MOSP00540 346 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 OR10J4P0C629 311 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 LINC00869P0C866 280 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 CEBPGP53567 150 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 RPL23P62829 140 aaKnown RBP7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 EBI3Q14213 229 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 PSG5Q15238 335 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 DNLZQ5SXM8 178 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 FAM78BQ5VT40 261 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 MIC13Q5XKP0 118 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 OR2T10Q8NGZ9 312 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 IGFBPL1Q8WX77 278 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 ACY3Q96HD9 319 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 PSMG3-AS1Q96PY0 264 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 ATP6V0BQ99437 205 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 F11RQ9Y624 299 aaKnown RBP7.03□□□□□ -1.28
SNRNP40-202ENST00000373720 TRBV9A0A0B4J1U6 114 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 ODF3BA8MYP8 253 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 FOXH1O75593 365 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 IGHV3-7P01780 117 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 SMIM6P0DI80 62 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 BRS3P32247 399 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 ADIRFQ15847 76 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 SPINK9Q5DT21 86 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 CST9LP1Q5W188 147 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 SSX7Q7RTT5 188 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 MOB3BQ86TA1 216 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 LINC01551Q86U37 167 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 OR51G1Q8NGK1 321 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 ABHD5Q8WTS1 349 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 PERPQ96FX8 193 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 C20orf24Q9BUV8 137 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 GAR1Q9NY12 217 aaKnown RBP7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 RFNGQ9Y644 331 aa7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 RP1L1Q8IWN7 2480 aaPredicted RBP7.02□□□□□ -1.29
SNRNP40-202ENST00000373720 DMXL1Q9Y485 3027 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 MAP1BP46821 2468 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 MED19A0JLT2 244 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 IGLC7A0M8Q6 106 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 FBLL1A6NHQ2 334 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 NBR2O15453 112 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 SLC25A17O43808 307 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 COX7A2P2O60397 106 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 GGCTO75223 188 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 FCN3O75636 299 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 PLAUP00749 431 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 IGHV2-5P01817 119 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 PFN1P07737 140 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 HIST1H1BP16401 226 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 IGFBP2P18065 325 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 OR10J1P30954 320 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 LGALS4P56470 323 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 DSCR9P59020 149 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 WT1-ASQ06250 92 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 KLK9Q2XQG4 91 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 AKIRIN2Q53H80 203 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 C10orf113Q5VZT2 155 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 ZNF562Q6V9R5 426 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 LINC00518Q8N0U6 118 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 LYPD1Q8N2G4 141 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 OR4X1Q8NH49 305 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 C1orf159Q96HA4 380 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 TXN2Q99757 166 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 TMPRSS5Q9H3S3 457 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 PITPNC1Q9UKF7 332 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 KLK9Q9UKQ9 250 aa7.01□□□□□ -1.29
SNRNP40-202ENST00000373720 HCFC1P51610 2035 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 RAI1Q7Z5J4 1906 aaPredicted RBP7□□□□□ -1.29
SNRNP40-202ENST00000373720 MDFIC2A0A1B0GVS7 189 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 A0A1W2PPI3 338 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 HELTA6NFD8 242 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 NPIPB5A8MRT5 1133 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 FAM106CPP0CH98 169 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 FCGR2BP31994 310 aaPredicted RBP7□□□□□ -1.29
SNRNP40-202ENST00000373720 GALR1P47211 349 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 RAB9AP51151 201 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 UBE2E1P51965 193 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 TIGITQ495A1 244 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 SMUG1Q53HV7 270 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 CYB5R2Q6BCY4 276 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 RASL11AQ6T310 242 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 Q8WTZ3 238 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 SSMEM1Q8WWF3 244 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 ITLN2Q8WWU7 325 aaPredicted RBP7□□□□□ -1.29
SNRNP40-202ENST00000373720 ISOC2Q96AB3 205 aa7□□□□□ -1.29
SNRNP40-202ENST00000373720 SFRP2Q96HF1 295 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms