RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 FAM19A2Q8N3H0 131 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 IMMP1LQ96LU5 166 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 IGFBP3P17936 291 aaPredicted RBP9.64□□□□□ -0.87
VCL-202ENST00000372755 GTSCR1Q86UQ5 136 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 ZNF646O15015 1829 aaPredicted RBP9.64□□□□□ -0.87
VCL-202ENST00000372755 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 CCL3L1P16619 93 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 RHOGP84095 191 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 OSTCQ9NRP0 149 aa9.64□□□□□ -0.87
VCL-202ENST00000372755 CD28P10747 220 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 LAIR2Q6ISS4 152 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 TMEM86BQ8N661 226 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 A0A1W2PRE2 83 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 IGHV4-39P01824 125 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 CELA3BP08861 270 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 PLNP26678 52 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 MORN2Q502X0 79 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 ST6GALNAC3Q8NDV1 305 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 TMEM170AQ8WVE7 144 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 A0A1B0GTI1 187 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 CLDN16Q9Y5I7 305 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 ASCC3Q8N3C0 2202 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 C8orf46Q8TAG6 207 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 COQ2Q96H96 371 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 OR9G9P0C7N8 305 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 LHX2P50458 406 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 GTF3AQ92664 365 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 WBP1Q96G27 269 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 H3BUT2 72 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 SERF1AO75920 110 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 IGLV3-19P01714 112 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 UMODP07911 640 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
VCL-202ENST00000372755 TNFRSF14Q92956 283 aa9.63□□□□□ -0.87
VCL-202ENST00000372755 F2Z2F3 143 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 CSRP3P50461 194 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 VKORC1Q9BQB6 163 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
VCL-202ENST00000372755 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 PCM1Q15154 2024 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 A8MXK9 166 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 WNT2P09544 360 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
VCL-202ENST00000372755 PRDM6Q9NQX0 595 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 SHISA3A0PJX4 238 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 ADMP35318 185 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 DSCR9P59020 149 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 ZXDCQ2QGD7 858 aaPredicted RBP9.62□□□□□ -0.87
VCL-202ENST00000372755 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 SPAG8Q99932 426 aaPredicted RBP9.62□□□□□ -0.87
VCL-202ENST00000372755 DPH3P1Q9H4G8 78 aa9.62□□□□□ -0.87
VCL-202ENST00000372755 FAM166AQ6J272 317 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 FBLN5Q9UBX5 448 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 MORN3Q6PF18 240 aaPredicted RBP9.61□□□□□ -0.87
VCL-202ENST00000372755 CHCHD1Q96BP2 118 aaKnown RBP9.61□□□□□ -0.87
VCL-202ENST00000372755 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
VCL-202ENST00000372755 KNL1Q8NG31 2342 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 TGFBR3LH3BV60 316 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 IGKCP01834 107 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 PAX8Q06710 450 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 OR9G4Q8NGQ1 327 aa9.61□□□□□ -0.87
VCL-202ENST00000372755 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
VCL-202ENST00000372755 ZNFX1Q9P2E3 1918 aaKnown RBP9.6□□□□□ -0.87
VCL-202ENST00000372755 TDGF1P3P51864 188 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 PLXNB2O15031 1838 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 CCL1P22362 96 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 ZNF837Q96EG3 531 aaPredicted RBP9.6□□□□□ -0.87
VCL-202ENST00000372755 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 ZNF638Q14966 1978 aaKnown RBP9.6□□□□□ -0.87
VCL-202ENST00000372755 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 S100A7L2Q5SY68 101 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 IGLV3-12A0A075B6K2 115 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 ATP5L2Q7Z4Y8 100 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms