RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 J3QW42 95 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 HLA-DQA1P01909 254 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 TNXAQ16473 311 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 STUMQ69YW2 141 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 INO80CQ6PI98 192 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-202ENST00000372748 C18orf32Q8TCD1 76 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF318Q5VUA4 2279 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-202ENST00000372748 ERASQ7Z444 233 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 FAM90A1Q86YD7 464 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 FDCSPQ8NFU4 85 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
COL9A2-202ENST00000372748 ISLRO14498 428 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 KIR2DL2P43627 348 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-202ENST00000372748 KLHDC1Q8N7A1 406 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
COL9A2-202ENST00000372748 TRGV8A0A0C4DH27 118 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
COL9A2-202ENST00000372748 CECR9P0C854 216 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 LOXL3P58215 753 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
COL9A2-202ENST00000372748 SSBP4Q9BWG4 385 aaPredicted RBP12.11□□□□□ -0.47
COL9A2-202ENST00000372748 IGKV1D-17A0A075B6S4 117 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 HSBP1O75506 76 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 MORN5Q5VZ52 161 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 OR4S2Q8NH73 311 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
COL9A2-202ENST00000372748 MFAP2P55001 183 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
COL9A2-202ENST00000372748 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
COL9A2-202ENST00000372748 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 RBX1P62877 108 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 PRR27Q6MZM9 219 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 C19orf35Q6ZS72 473 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 OR2Z1Q8NG97 314 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
COL9A2-202ENST00000372748 M0R2Z0 102 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
COL9A2-202ENST00000372748 PPOXP50336 477 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 GDF5OSQ5U4N7 250 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 RNASEKQ6P5S7 137 aaKnown RBP12.09□□□□□ -0.47
COL9A2-202ENST00000372748 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 DDB2Q92466 427 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 IGF2BP2-AS1Q96M15 143 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 IDI2-AS1Q9NZ38 188 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
COL9A2-202ENST00000372748 OR51B2Q9Y5P1 312 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 IZUMO1RA6ND01 250 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 MMP23AO75900 390 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 CAMPP49913 170 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 COX11Q9Y6N1 276 aa12.09□□□□□ -0.47
COL9A2-202ENST00000372748 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
COL9A2-202ENST00000372748 A0A1W2PN81 502 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 NKX6-3A6NJ46 265 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 J3QR06 171 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 IGLL1P15814 213 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 SELENOVP59797 346 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 BET1LQ9NYM9 111 aa12.08□□□□□ -0.47
COL9A2-202ENST00000372748 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 CEACAM8P31997 349 aaPredicted RBP12.08□□□□□ -0.48
COL9A2-202ENST00000372748 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 COX19Q49B96 90 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 ZNF738Q8NE65 137 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
COL9A2-202ENST00000372748 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 SPATA12Q7Z6I5 190 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 SGK494Q96LW2 274 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 CLEC5AQ9NY25 188 aa12.08□□□□□ -0.48
COL9A2-202ENST00000372748 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 WT1P19544 449 aaPredicted RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 C22orf15Q8WYQ4 148 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 CORO2AQ92828 525 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 CALYQ9NYX4 217 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 YLPM1P49750 1951 aaKnown RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 REG1AP05451 166 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 PYYP10082 97 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 ZNRD1Q9P1U0 126 aa12.07□□□□□ -0.48
COL9A2-202ENST00000372748 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
COL9A2-202ENST00000372748 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms