RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 hCG_38984A0A1B0GV85 526 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 C5orf63A6NC05 138 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 NAPSAO96009 420 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 B3GALT5-AS1P59052 145 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 RPEL1Q2QD12 228 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 SLC35E4Q6ICL7 350 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 SSC4DQ8WTU2 575 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 GRAMD2BQ96HH9 432 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 SLC25A22Q9H936 323 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 KCNIP2Q9NS61 270 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF391Q9UJN7 358 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 HSPB8Q9UJY1 196 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF257Q9Y2Q1 563 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 PHF3Q92576 2039 aaKnown RBP7.32□□□□□ -1.24
ATG4A-203ENST00000372232 KMT2EQ8IZD2 1858 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF850A8MQ14 1090 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 M0R2Z0 102 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 LCE2BO14633 110 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 HSBP1O75506 76 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 NDUFB4O95168 129 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 IGLV3-1P01715 115 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 P04436 131 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF883P0CG24 379 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 TNXAQ16473 311 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 RSPO1Q2MKA7 263 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-203ENST00000372232 YRDCQ86U90 279 aaKnown RBP7.32□□□□□ -1.24
ATG4A-203ENST00000372232 TTC9CQ8N5M4 171 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 OR1F12Q8NHA8 337 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 TAF15Q92804 592 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATG4A-203ENST00000372232 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 SPAG8Q99932 426 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-203ENST00000372232 OR2D2Q9H210 308 aa7.32□□□□□ -1.24
ATG4A-203ENST00000372232 FBLL1A6NHQ2 334 aaKnown RBP7.31□□□□□ -1.24
ATG4A-203ENST00000372232 F5H5K5 113 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 ISLRO14498 428 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 RFPL3SP0C7P2 107 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 FABP2P12104 132 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 FABP6P51161 128 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 ARL16Q0P5N6 197 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 MMD2Q8IY49 270 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 C5orf30Q96GV9 206 aa7.31□□□□□ -1.24
ATG4A-203ENST00000372232 B5MCH6 92 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 HMGB3O15347 200 aaKnown RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 COX8AP10176 69 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 F2RP25116 425 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 ATP5J2P56134 94 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 HBG1P69891 147 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 HBG2P69892 147 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 CX3CL1P78423 397 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 PSG7Q13046 419 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 FAM27BQ5VT28 67 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 GGNQ86UU5 652 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 BPIFA4PQ86YQ2 179 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 KIR3DL3Q8N743 410 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 OCC1Q8TAD7 63 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 HDHD3Q9BSH5 251 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 NDFIP1Q9BT67 221 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 ARRDC1-AS1Q9H2J1 176 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 GPR179Q6PRD1 2367 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 CNTRLQ7Z7A1 2325 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 MUC6Q6W4X9 2439 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 H3BP45 60 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 DHRS3O75911 302 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 COL8A1P27658 744 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 EIF3IQ13347 325 aaKnown RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 KLF5Q13887 457 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 OR10D3Q8NH80 312 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 MBD3L2Q8NHZ7 208 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 NAA38Q9BRA0 125 aaKnown RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 SPRY4Q9C004 299 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 DEPPQ9NTK1 212 aa7.3□□□□□ -1.24
ATG4A-203ENST00000372232 NCOA6Q14686 2063 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-203ENST00000372232 HELTA6NFD8 242 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 F8W1H4 67 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 M0R135 149 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 SP9P0CG40 484 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 UQCRFS1P47985 274 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 KISS1Q15726 138 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 DMRTC1Q5HYR2 192 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 FAM120AOSQ5T036 256 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 CRIP3Q6Q6R5 217 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 Q6ZSR3 168 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 LCNL1Q6ZST4 164 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 C6orf201Q7Z4U5 140 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF611Q8N823 705 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 OR5D13Q8NGL4 314 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 OR10G9Q8NGN4 311 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 OR10G7Q8NGN6 311 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 SPTSSAQ969W0 71 aa7.29□□□□□ -1.24
ATG4A-203ENST00000372232 ZNF799Q96GE5 643 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms