RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 BRS3P32247 399 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 RPL29P47914 159 aaKnown RBP13.92□□□□□ -0.18
SSBP3-203ENST00000371319 FGF8P55075 233 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-203ENST00000371319 OR1P1Q8NH06 330 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 SLC35E1Q96K37 410 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PSMG3-AS1Q96PY0 264 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 RARRES2Q99969 163 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 ACTR3CQ9C0K3 210 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-203ENST00000371319 EIF5A2Q9GZV4 153 aaKnown RBP13.92□□□□□ -0.18
SSBP3-203ENST00000371319 KCNIP2Q9NS61 270 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 SLC39A9Q9NUM3 307 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 SLC45A2Q9UMX9 530 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 CNIH1O95406 144 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 SFTA3P0C7M3 94 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 LINC00869P0C866 280 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 IGHV4-38-2P0DP08 117 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PRR20EP86478 221 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PRR20CP86479 221 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PRR20DP86480 221 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PRR20BP86481 221 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 PRR20AP86496 221 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 RAB31Q13636 194 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 FXYD3Q14802 87 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 Q8N9W7 124 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 HIF1ANQ9NWT6 349 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
SSBP3-203ENST00000371319 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
SSBP3-203ENST00000371319 LRRK2Q5S007 2527 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 NCBP2LA6PVI3 153 aaKnown RBP13.91□□□□□ -0.18
SSBP3-203ENST00000371319 CYB5BO43169 146 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 SCO1O75880 301 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 APOC3P02656 99 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 CRYGCP07315 174 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 DEFA4P12838 97 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 B2MP61769 119 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 ZNF506Q5JVG8 444 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 HIST2H2BCQ6DN03 193 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 STPG3Q8N7X2 389 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 RAB24Q969Q5 203 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 SEC11CQ9BY50 192 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 MRPL36Q9P0J6 103 aaKnown RBP13.91□□□□□ -0.18
SSBP3-203ENST00000371319 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
SSBP3-203ENST00000371319 NAV3Q8IVL0 2385 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 CRYBG3Q68DQ2 2970 aa13.91□□□□□ -0.18
SSBP3-203ENST00000371319 F8W036 122 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 OR10J1P30954 320 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-203ENST00000371319 NDPQ00604 133 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-203ENST00000371319 ICAM4Q14773 271 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 HAGHQ16775 308 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 ZNF562Q6V9R5 426 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 ABHD5Q8WTS1 349 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 MISP3Q96FF7 219 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 ACY3Q96HD9 319 aa13.9□□□□□ -0.18
SSBP3-203ENST00000371319 ASH1LQ9NR48 2969 aaKnown RBP13.9□□□□□ -0.18
SSBP3-203ENST00000371319 A0A0U1RQK1 487 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 LOC102723971A0A1B0GUV8 181 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 HMGB3O15347 200 aaKnown RBP13.89□□□□□ -0.19
SSBP3-203ENST00000371319 AVPP01185 164 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 CTRB1P17538 263 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 CX3CL1P78423 397 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 BRD3OSQ6XYD6 125 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 THAP8Q8NA92 274 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 C1RLQ9NZP8 487 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 SPG11Q96JI7 2443 aa13.89□□□□□ -0.19
SSBP3-203ENST00000371319 IGKV1D-37A0A075B6S9 117 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 IGHV3-48P01763 117 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 GATA3P23771 443 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 PPT1P50897 306 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 PMS2P11Q13670 270 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 KLF17Q5JT82 389 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-203ENST00000371319 Q5PR19 223 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 ASPHD1Q5U4P2 390 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 ETFRF1Q6IPR1 90 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 KRTAP1-3Q8IUG1 177 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 NPIPB3Q92617 1050 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 SLC25A33Q9BSK2 321 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
SSBP3-203ENST00000371319 MEGF9Q9H1U4 602 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 SMDT1Q9H4I9 107 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 GNG13Q9P2W3 67 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 RNF223E7ERA6 249 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 CORTO00230 105 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 GUCA2BQ16661 112 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 ATRAIDQ6UW56 229 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 CYP2G1PQ6ZSU1 146 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 ARPC1AQ92747 370 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 WNT10AQ9GZT5 417 aa13.88□□□□□ -0.19
SSBP3-203ENST00000371319 SOX21Q9Y651 276 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-203ENST00000371319 CHD6Q8TD26 2715 aa13.87□□□□□ -0.19
SSBP3-203ENST00000371319 CR1P17927 2039 aa13.87□□□□□ -0.19
SSBP3-203ENST00000371319 IGHV7-81A0A0B4J1V7 117 aa13.87□□□□□ -0.19
SSBP3-203ENST00000371319 HLA-DRB1P01911 266 aa13.87□□□□□ -0.19
SSBP3-203ENST00000371319 SRP19P09132 144 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms