RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
LMO4-201ENST00000370542 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 NDUFB3O43676 98 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 SYNGR2O43760 224 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 ANGPTL7O43827 346 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 NAPSAO96009 420 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 SERPINE2P07093 398 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 PROK1P58294 105 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 KRTAP10-3P60369 221 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 RPL19P84098 196 aaKnown RBP12.05□□□□□ -0.48
LMO4-201ENST00000370542 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 ZNF880Q6PDB4 577 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 GAPTQ8N292 157 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 ZNRD1Q9P1U0 126 aa12.05□□□□□ -0.48
LMO4-201ENST00000370542 NPIPB11E5RHQ5 1161 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 F6UZH7 168 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 M0R1W7 72 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 EREGO14944 169 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 PGLYRP1O75594 196 aaPredicted RBP12.04□□□□□ -0.48
LMO4-201ENST00000370542 TMEM50AO95807 157 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 HERPUD1Q15011 391 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 ZDHHC23Q8IYP9 409 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 TNFRSF19Q9NS68 423 aa12.04□□□□□ -0.48
LMO4-201ENST00000370542 IGKV1-27A0A075B6S5 117 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 DEGS1O15121 323 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 PDE6DO43924 150 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 SNRPCP09234 159 aaKnown RBP12.03□□□□□ -0.48
LMO4-201ENST00000370542 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
LMO4-201ENST00000370542 OR3A1P47881 315 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 UBE2E1P51965 193 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 TPPP2P59282 170 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 CEACAM21Q3KPI0 293 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 PLCXD3Q63HM9 321 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 Q6ZSV7 163 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 MOB1BQ7L9L4 216 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 MKXQ8IYA7 352 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 MRPL30Q8TCC3 161 aaKnown RBP12.03□□□□□ -0.48
LMO4-201ENST00000370542 PIGCQ92535 297 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
LMO4-201ENST00000370542 IGKV1D-17A0A075B6S4 117 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 NPFFO15130 113 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 RHBDL1O75783 438 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 MMP23AO75900 390 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 ESDP10768 282 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 GNG3P63215 75 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 ZNF726P1Q15940 193 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 TMEM183BQ1AE95 376 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 PIGYQ3MUY2 71 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 SDSLQ96GA7 329 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 RBKSQ9H477 322 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
LMO4-201ENST00000370542 ONECUT1Q9UBC0 465 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 SLC25A10Q9UBX3 287 aaPredicted RBP12.02□□□□□ -0.49
LMO4-201ENST00000370542 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 OR2W1Q9Y3N9 320 aa12.02□□□□□ -0.49
LMO4-201ENST00000370542 IGKV1-12A0A0C4DH73 117 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 NKX6-3A6NJ46 265 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 OR5B21A6NL26 309 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 TIMM23O14925 209 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 OR7C1O76099 320 aaPredicted RBP12.01□□□□□ -0.49
LMO4-201ENST00000370542 IGKV1D-12P01611 117 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 PSG2P11465 335 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 COX19Q49B96 90 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 HCP5Q6MZN7 132 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 AJUBAQ96IF1 538 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 MS4A10Q96PG2 267 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 PARLQ9H300 379 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
LMO4-201ENST00000370542 A0A1W2PPQ1 181 aa12□□□□□ -0.49
LMO4-201ENST00000370542 GPM6AP51674 278 aa12□□□□□ -0.49
LMO4-201ENST00000370542 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
LMO4-201ENST00000370542 MSMO1Q15800 293 aa12□□□□□ -0.49
LMO4-201ENST00000370542 BRICD5Q6PL45 260 aa12□□□□□ -0.49
LMO4-201ENST00000370542 ZBTB34Q8NCN2 500 aa12□□□□□ -0.49
LMO4-201ENST00000370542 TMEM37Q8WXS4 190 aa12□□□□□ -0.49
LMO4-201ENST00000370542 RSG1Q9BU20 258 aa12□□□□□ -0.49
LMO4-201ENST00000370542 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
LMO4-201ENST00000370542 RFNGQ9Y644 331 aa12□□□□□ -0.49
LMO4-201ENST00000370542 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
LMO4-201ENST00000370542 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 ZNF705FA8MVS1 300 aaPredicted RBP11.99□□□□□ -0.49
LMO4-201ENST00000370542 M0QZ24 198 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 TFF1P04155 84 aa11.99□□□□□ -0.49
LMO4-201ENST00000370542 ZNF705DP0CH99 300 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms