RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GSKIPQ9P0R6 139 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 ALG5Q9Y673 324 aa12.05□□□□□ -0.48
PRPF38B-202ENST00000370022 RNASE2P10153 161 aaKnown RBP12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 MFAP2P55001 183 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 PVRIGQ6DKI7 326 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 ZNF343Q6P1L6 599 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 EEF1AKMT3Q96AZ1 226 aa12.04□□□□□ -0.48
PRPF38B-202ENST00000370022 TRBV7-1A0A0A6YYK4 115 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 WRBO00258 174 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 GOSR2O14653 212 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 NDUFB8O95169 186 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 EXOSC2Q13868 293 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 SLC7A5P1Q8MH63 180 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
PRPF38B-202ENST00000370022 ANK2Q01484 3957 aa12.02□□□□□ -0.48
PRPF38B-202ENST00000370022 NPY1RP25929 384 aa12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 MYCNOSP40205 109 aa12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 DEFA5Q01523 94 aa12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 ATP6V0BQ99437 205 aa12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 RANGRFQ9HD47 186 aaPredicted RBP12.02□□□□□ -0.49
PRPF38B-202ENST00000370022 CCL24O00175 119 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 IFNA10P01566 189 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 PF4P02776 101 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 CTAG1AP78358 180 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 OR11H1Q8NG94 326 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 OR1N2Q8NGR9 330 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 PEF1Q9UBV8 284 aaKnown RBP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 TSPAN15O95858 294 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 POLR2GP62487 172 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 ZNF616Q08AN1 781 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 FHL3Q13643 280 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 DPF1Q92782 380 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 NMES1Q9C002 83 aa12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 GAR1Q9NY12 217 aaKnown RBP12.01□□□□□ -0.49
PRPF38B-202ENST00000370022 LINC01619G3V211 115 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 I3L2K1 104 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 K7EIM0 57 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 MT-CO2P00403 227 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 MBPP02686 304 aaPredicted RBP12□□□□□ -0.49
PRPF38B-202ENST00000370022 OR8U8P0C7N1 319 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 IAPPP10997 89 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 EIF2B2P49770 351 aaKnown RBP12□□□□□ -0.49
PRPF38B-202ENST00000370022 TAS2R30P59541 319 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 RAB11AP62491 216 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 IL15RAQ13261 267 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 DEFB136Q30KP8 78 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 ETV3LQ6ZN32 361 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
PRPF38B-202ENST00000370022 SMIM8Q96KF7 97 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 MED28Q9H204 178 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 C21orf62Q9NYP8 219 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 MGAT4CQ9UBM8 478 aa12□□□□□ -0.49
PRPF38B-202ENST00000370022 RPS10-NUDT3A0A1W2PQS6 291 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 MFSD2BA6NFX1 497 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 RGS13O14921 159 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 SSSCA1O60232 199 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 ZP3P21754 424 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 OPRK1P41145 380 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 TXN2Q99757 166 aa11.99□□□□□ -0.49
PRPF38B-202ENST00000370022 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 A0A087WW49 117 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 H2BFSP57053 126 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 TMEM170AQ8WVE7 144 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 RCL1Q9Y2P8 373 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-202ENST00000370022 K7EPK0 472 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 TSC22D2O75157 780 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 SIX6O95475 246 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 IFNA4P05014 189 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 PVALBP20472 110 aaPredicted RBP11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 M6PRP20645 277 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 MFAP4P55083 255 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 SPANXN5Q5MJ07 72 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 C11orf87Q6NUJ2 197 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 CLEC19AQ6UXS0 136 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 DUX3Q96PT4 197 aa11.97□□□□□ -0.49
PRPF38B-202ENST00000370022 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms