RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IGHV1-8P0DP01 117 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 ECSCRQ19T08 205 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 ZNF585BQ52M93 769 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 RNF5Q99942 180 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 SHANK1Q9Y566 2161 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 POLEQ07864 2286 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 CBY3A6NI87 242 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 E7EQL1 145 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 TOX4O94842 621 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 P01737 135 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 AMTP48728 403 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 RAB9AP51151 201 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 EFNB3Q15768 340 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 C5orf24Q7Z6I8 188 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 C1QL4Q86Z23 238 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 HIST3H2BBQ8N257 126 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 SGMS2Q8NHU3 365 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 SRD5A3Q9H8P0 318 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 NAGKQ9UJ70 344 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 LINC00473A8K010 186 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 SOD3P08294 240 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 KHDC1LQ5JSQ8 128 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 TEX36Q5VZQ5 186 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 UNQ5815/PRO19632Q6UWF5 114 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 PPP1R27Q86WC6 154 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 NDUFAF3Q9BU61 184 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 FBXL15Q9H469 300 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV3-21A0A0B4J1V1 117 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 OOSP1A8MZH6 123 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 BMPR1BO00238 502 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 TCF21O43680 179 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 IGFBP2P18065 325 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 COL8A1P27658 744 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 EFNA4P52798 201 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 CD69Q07108 199 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 IL15RAQ13261 267 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 COTL1Q14019 142 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 ICAM4Q14773 271 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM155Q4W5P6 130 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 PRR30Q53SZ7 412 aaPredicted RBP4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 FAM168AQ92567 244 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 C14orf144Q96I85 54 aa4.38□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV2-26A0A0B4J1V2 119 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 A0A0G2JRQ6 117 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 NBR2O15453 112 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 HSBP1O75506 76 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 IGKV1D-33P01593 117 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 IGKV1-33P01594 117 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 MT-ND6P03923 174 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 REG1AP05451 166 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 WNT2P09544 360 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 PCP4P48539 62 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 RELBQ01201 579 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 C2orf83Q53S99 150 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 Q6ZN92 141 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM167AQ8TBQ9 72 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 HIST1H2BLQ99880 126 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 ABCA4P78363 2273 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 LYNX1G3V0Z9 82 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 H0Y8G0 127 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 M0R1W7 72 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 LYNX1P0DP58 116 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 ANOS1P23352 680 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 Q6ZRM9 215 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 OR4C5Q8NGB2 326 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 FGF23Q9GZV9 251 aaPredicted RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 ATG2AQ2TAZ0 1938 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 TEX50A0A1B0GTY4 177 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 A8MWL6 223 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 FNDC10F2Z333 226 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 IGHV2-5P01817 119 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 RPL7P18124 248 aaKnown RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 ARL3P36405 182 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 CDKN1AP38936 164 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 LCN2P80188 198 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 SCGB2A2Q13296 93 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 C11orf53Q8IXP5 236 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 HSPB9Q9BQS6 159 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 COL5A1P20908 1838 aaPredicted RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 EML6Q6ZMW3 1958 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 PGPA6NDG6 321 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 C15orf65H3BRN8 121 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 RRHO14718 337 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 JOSD1Q15040 202 aaPredicted RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 COL5A1-AS1Q5SY13 56 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 TREML4Q6UXN2 200 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 SRSF12Q8WXF0 261 aaKnown RBP4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 RFNGQ9Y644 331 aa4.37□□□□□ -1.71
SMNDC1-202ENST00000369603 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 SERTM2A0A1B0GWG4 89 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 H0YJW9 148 aa4.36□□□□□ -1.71
SMNDC1-202ENST00000369603 ISLRO14498 428 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms