RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 IGLL1P15814 213 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 PPOXP50336 477 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MFAP2P55001 183 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MPV17L2Q567V2 206 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 HES3Q5TGS1 186 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 GDF5OSQ5U4N7 250 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MORN5Q5VZ52 161 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 WDR73Q6P4I2 378 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 TCTEX1D1Q8N7M0 179 aa10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MAFAQ8NHW3 353 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-201ENST00000369407 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
PHGDH-201ENST00000369407 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 TRBV9A0A0B4J1U6 114 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 M0R2Z0 102 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 IGLV2-8P01709 118 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
PHGDH-201ENST00000369407 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 DUSP13Q9UII6 198 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 MORN2Q502X0 79 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 ZNRF1Q8ND25 227 aa10.09□□□□□ -0.79
PHGDH-201ENST00000369407 ZNF331Q9NQX6 463 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-201ENST00000369407 EP300Q09472 2414 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-201ENST00000369407 M0R296 226 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 NTN3O00634 580 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-201ENST00000369407 TIMM8AO60220 97 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-201ENST00000369407 LPAL2Q16609 132 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 SPACA3Q8IXA5 215 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 OR52E5Q8NH55 327 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 LRRC29Q8WV35 223 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 NEUROG1Q92886 237 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 SARAFQ96BY9 339 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 MT-ND6P03923 174 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 AREGP15514 252 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 RAB31Q13636 194 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 OR9G1Q8NH87 305 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 ZNRD1Q9P1U0 126 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 PILRBQ9UKJ0 227 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 NUDT3O95989 172 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 C6orf15Q6UXA7 325 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-201ENST00000369407 CHODLQ9H9P2 273 aa10.08□□□□□ -0.8
PHGDH-201ENST00000369407 TTC28Q96AY4 2481 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 IQCF6A8MYZ5 107 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 CORTO00230 105 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 SNAI2O43623 268 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 WISP2O76076 250 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 IGHV1-2P23083 117 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 MEOX1P50221 254 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRR20EP86478 221 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRR20CP86479 221 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRR20DP86480 221 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRR20BP86481 221 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRR20AP86496 221 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 FAM201AQ5SY85 155 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 TRAT1Q6PIZ9 186 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 ZNF841Q6ZN19 808 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PTPRBP23467 1997 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 PRDX2P32119 198 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-201ENST00000369407 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
PHGDH-201ENST00000369407 TRAV30A0A087WSZ9 112 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
PHGDH-201ENST00000369407 PYYP10082 97 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 BMI1P35226 326 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 TCTAP57738 103 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 OR1N2Q8NGR9 330 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 WFDC12Q8WWY7 111 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 OR8B2Q96RD0 313 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 IFI27L2Q9H2X8 130 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 YLPM1P49750 1951 aaKnown RBP10.06□□□□□ -0.8
PHGDH-201ENST00000369407 SMIM27A0A1W2PRY6 76 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 PRB4P10163 310 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-201ENST00000369407 HOXC12P31275 282 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 SPRNQ5BIV9 151 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 WDR31Q8NA23 367 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 LY96Q9Y6Y9 160 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 IGHV2-26A0A0B4J1V2 119 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 ISLRO14498 428 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 TOMM40O96008 361 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 PLAUP00749 431 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
PHGDH-201ENST00000369407 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 IZUMO1RA6ND01 250 aa10.05□□□□□ -0.8
PHGDH-201ENST00000369407 CA7P43166 264 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms