RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 Q6YL49 198 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 NPVFQ9HCQ7 196 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 DMRT1Q9Y5R6 373 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 ZNF469Q96JG9 3925 aaPredicted RBP18.85■□□□□ 0.61
SNX3-203ENST00000368979 SMCO3A2RU48 225 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 NPIPB5A8MRT5 1133 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 M0QZK8 103 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 CENPVQ7Z7K6 275 aaPredicted RBP18.85■□□□□ 0.61
SNX3-203ENST00000368979 OR2G3Q8NGZ4 309 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 LRRC20Q8TCA0 184 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 CACNG8Q8WXS5 425 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 TIMM9Q9Y5J7 89 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 CELSR1Q9NYQ6 3014 aa18.85■□□□□ 0.61
SNX3-203ENST00000368979 SH2D7A6NKC9 451 aaPredicted RBP18.84■□□□□ 0.61
SNX3-203ENST00000368979 CORTO00230 105 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 BTNL8Q6UX41 500 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 SLC16A13Q7RTY0 426 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 TTC9CQ8N5M4 171 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 OR5R1Q8NH85 324 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 SGMS2Q8NHU3 365 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 NPCDR1Q9BY65 106 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 WNT10AQ9GZT5 417 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 FNDC4Q9H6D8 234 aaPredicted RBP18.84■□□□□ 0.61
SNX3-203ENST00000368979 LSM4Q9Y4Z0 139 aaKnown RBP18.84■□□□□ 0.61
SNX3-203ENST00000368979 NAV3Q8IVL0 2385 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 ATP6V0E1O15342 81 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 MPDU1O75352 247 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 NDUFA5Q16718 116 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 TMEM182Q6ZP80 229 aaPredicted RBP18.84■□□□□ 0.61
SNX3-203ENST00000368979 IL17RELQ6ZVW7 336 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 PARP11Q9NR21 331 aa18.84■□□□□ 0.61
SNX3-203ENST00000368979 MYO9AB2RTY4 2548 aa18.83■□□□□ 0.61
SNX3-203ENST00000368979 AKAP9Q99996 3911 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 OPRK1P41145 380 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 GAMTQ14353 236 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 MLANAQ16655 118 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 SPNS3Q6ZMD2 512 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 LFNGQ8NES3 379 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 OR1L6Q8NGR2 347 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 YAE1D1Q9NRH1 226 aa18.83■□□□□ 0.6
SNX3-203ENST00000368979 RAB5CP51148 216 aa18.82■□□□□ 0.6
SNX3-203ENST00000368979 AKR1C1Q04828 323 aa18.82■□□□□ 0.6
SNX3-203ENST00000368979 TMEM144Q7Z5S9 345 aa18.82■□□□□ 0.6
SNX3-203ENST00000368979 MISP3Q96FF7 219 aa18.82■□□□□ 0.6
SNX3-203ENST00000368979 UMAD1C9J7I0 102 aa18.81■□□□□ 0.6
SNX3-203ENST00000368979 SERF2P84101 59 aa18.81■□□□□ 0.6
SNX3-203ENST00000368979 SLC35E1Q96K37 410 aa18.81■□□□□ 0.6
SNX3-203ENST00000368979 MGST2Q99735 147 aa18.81■□□□□ 0.6
SNX3-203ENST00000368979 FLNAP21333 2647 aaKnown RBP18.81■□□□□ 0.6
SNX3-203ENST00000368979 LINC01548A6NM66 108 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 ZNF705EA8MWA4 302 aaPredicted RBP18.8■□□□□ 0.6
SNX3-203ENST00000368979 DEFA4P12838 97 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 CRIP2P52943 208 aaPredicted RBP18.8■□□□□ 0.6
SNX3-203ENST00000368979 ETFRF1Q6IPR1 90 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 TEPPQ6URK8 271 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 SAT2Q96F10 170 aaPredicted RBP18.8■□□□□ 0.6
SNX3-203ENST00000368979 CXorf58Q96LI9 332 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 VPREB3Q9UKI3 123 aa18.8■□□□□ 0.6
SNX3-203ENST00000368979 LINC00862A6NCI5 91 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 BTBD17A6NE02 478 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 C17orf112F2Z3M2 114 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 OR2T6Q8NHC8 308 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 TMEM68Q96MH6 324 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 TRIM77I1YAP6 450 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 UNQ5815/PRO19632Q6UWF5 114 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 ZNF709Q8N972 641 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 FAM110DQ8TAY7 271 aaPredicted RBP18.79■□□□□ 0.6
SNX3-203ENST00000368979 GGTLC1Q9BX51 225 aa18.79■□□□□ 0.6
SNX3-203ENST00000368979 CSPG4Q6UVK1 2322 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 IGLV11-55A0A075B6I3 123 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 IGKV1OR2-108A0A075B7D4 117 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 I3L2K1 104 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 TSPAN9O75954 239 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 MT-CO2P00403 227 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 IGHG2P01859 326 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 SRP14P37108 136 aaKnown RBP18.78■□□□□ 0.6
SNX3-203ENST00000368979 ECSCRQ19T08 205 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 AKIRIN2Q53H80 203 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 AKR1C8PQ5T2L2 129 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 SLC7A5P1Q8MH63 180 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 FANCD2OSQ96PS1 177 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 TMEM160Q9NX00 188 aa18.78■□□□□ 0.6
SNX3-203ENST00000368979 MRPL36Q9P0J6 103 aaKnown RBP18.78■□□□□ 0.6
SNX3-203ENST00000368979 AGPAT2O15120 278 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 HOXA3O43365 443 aaPredicted RBP18.77■□□□□ 0.6
SNX3-203ENST00000368979 PRH1P02810 166 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 CAMLGP49069 296 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 C19orf54Q5BKX5 351 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 ACSM6Q6P461 480 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 Q6ZRG5 221 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 ACY3Q96HD9 319 aa18.77■□□□□ 0.6
SNX3-203ENST00000368979 FHITP49789 147 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 BLCAPP62952 87 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 BLOC1S1P78537 153 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 KLK9Q2XQG4 91 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 C9orf152Q5JTZ5 239 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 SIGLECL1Q8N7X8 197 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 OR5T1Q8NG75 326 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 TMUB1Q9BVT8 246 aa18.76■□□□□ 0.59
SNX3-203ENST00000368979 VSIRQ9H7M9 311 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms