RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TBX6O95947 436 aaPredicted RBP15.2■□□□□ 0.02
SNX27-202ENST00000368841 RIPPLY2Q5TAB7 128 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 GTSCR1Q86UQ5 136 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 ZNF236Q9UL36 1845 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 OR10W1Q8NGF6 305 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 SHISA3A0PJX4 238 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 ZIC4Q8N9L1 334 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
SNX27-202ENST00000368841 RTN4RL2Q86UN3 420 aa15.19■□□□□ 0.02
SNX27-202ENST00000368841 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
SNX27-202ENST00000368841 LSM4Q9Y4Z0 139 aaKnown RBP15.19■□□□□ 0.02
SNX27-202ENST00000368841 SAP30O75446 220 aa15.19■□□□□ 0.02
SNX27-202ENST00000368841 C17orf100A8MU93 164 aa15.19■□□□□ 0.02
SNX27-202ENST00000368841 SPTBP11277 2137 aa15.19■□□□□ 0.02
SNX27-202ENST00000368841 TMEM250H0YL14 139 aa15.19■□□□□ 0.02
SNX27-202ENST00000368841 IGKV2-40A0A087WW87 121 aaPredicted RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 A0A1B0GUT8 65 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 IGKV2D-40P01614 121 aaPredicted RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 RHOGP84095 191 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 SRSF3P84103 164 aaKnown RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 CHD5Q8TDI0 1954 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 IFITM2Q01629 132 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 PAX2Q02962 417 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 OR9G4Q8NGQ1 327 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 SDHCQ99643 169 aaPredicted RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 VKORC1Q9BQB6 163 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 KNTC1P50748 2209 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 NBR2O15453 112 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 PSMG4Q5JS54 123 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 TRBV9A0A0B4J1U6 114 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 TRAV5A0A0B4J249 113 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 FAM181AQ8N9Y4 354 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 C1QL4Q86Z23 238 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 NXT2Q9NPJ8 142 aaKnown RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 PLXNA1Q9UIW2 1896 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 TRAV14DV4A0A0A6YYC5 116 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 RPL15P61313 204 aaKnown RBP15.18■□□□□ 0.02
SNX27-202ENST00000368841 LYZL4Q96KX0 146 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 STRCP1A6NGW2 1772 aa15.18■□□□□ 0.02
SNX27-202ENST00000368841 DNAJC13O75165 2243 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 NHLRC3Q5JS37 347 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 ERVK11-1P61568 191 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 Q5PR19 223 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 C19orf24Q9BVV8 132 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 IGKV1D-13A0A0B4J2D9 117 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 IGKV1-13P0DP09 117 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 CD28P10747 220 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 NDPQ00604 133 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 MLNRO43193 412 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.17■□□□□ 0.02
SNX27-202ENST00000368841 C1QTNF9P0C862 333 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 TDGF1P3P51864 188 aa15.17■□□□□ 0.02
SNX27-202ENST00000368841 THBDP07204 575 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 VCX2Q9H322 139 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 F5P12259 2224 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 TM4SF5O14894 197 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 GPX4P36969 197 aaPredicted RBP15.16■□□□□ 0.02
SNX27-202ENST00000368841 FOXF2Q12947 444 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 ASCL4Q6XD76 172 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 SNRNP200O75643 2136 aaKnown RBP15.16■□□□□ 0.02
SNX27-202ENST00000368841 PAPPA-AS1Q5QFB9 102 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 NRN1LQ496H8 165 aa15.16■□□□□ 0.02
SNX27-202ENST00000368841 OSR1Q8TAX0 266 aaPredicted RBP15.16■□□□□ 0.02
SNX27-202ENST00000368841 TRAV8-2A0A0B4J237 113 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 UCP3P55916 312 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 VMO1Q7Z5L0 202 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 H3BUT2 72 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 OR9G9P0C7N8 305 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 TTC9CQ8N5M4 171 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 GDF15Q99988 308 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 IGFL4Q6B9Z1 124 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 BRD3OSQ6XYD6 125 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 FGFBP3Q8TAT2 258 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 IGHV1-18A0A0C4DH31 117 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 TIMM23O14925 209 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 CHCHD5Q9BSY4 110 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 ZNF257Q9Y2Q1 563 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 PSME4Q14997 1843 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 ATP5LO75964 103 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 COQ2Q96H96 371 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 SPCS1Q9Y6A9 102 aa15.15■□□□□ 0.02
SNX27-202ENST00000368841 DMRTC2Q8IXT2 367 aaPredicted RBP15.14■□□□□ 0.01
SNX27-202ENST00000368841 PEF1Q9UBV8 284 aaKnown RBP15.14■□□□□ 0.01
SNX27-202ENST00000368841 PARP14Q460N5 1801 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 ADARB2-AS1A8MUL3 147 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 C1QTNF5Q9BXJ0 243 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.14■□□□□ 0.01
SNX27-202ENST00000368841 NHP2Q9NX24 153 aaKnown RBP15.14■□□□□ 0.01
SNX27-202ENST00000368841 METRNQ9UJH8 293 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 IZUMO1RA6ND01 250 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 C8orf46Q8TAG6 207 aa15.14■□□□□ 0.01
SNX27-202ENST00000368841 SLC25A20O43772 301 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
SNX27-202ENST00000368841 COL24A1Q17RW2 1714 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 ORMDL3Q8N138 153 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 CFHR5Q9BXR6 569 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 IQCF6A8MYZ5 107 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 CD200R1LQ6Q8B3 271 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms