RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SMIM31A0A1B0GVY4 71 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 GNG7O60262 68 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 CD5P06127 495 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
CKS1B-202ENST00000368436 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
CKS1B-202ENST00000368436 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 A0A087WXM4 84 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 INS-IGF2F8WCM5 200 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 RND3P61587 244 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 PAFAH1B2P68402 229 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 SNX29P2Q8IUI4 249 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 GBGT1Q8N5D6 347 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
CKS1B-202ENST00000368436 RARRES2Q99969 163 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 VCX3AQ9NNX9 186 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 FRAS1Q86XX4 4008 aa11.75□□□□□ -0.53
CKS1B-202ENST00000368436 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
CKS1B-202ENST00000368436 P0C879 139 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 ELK1P19419 428 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 NPBWR1P48145 328 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 NCS1P62166 190 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 ZNF486Q96H40 463 aaPredicted RBP11.74□□□□□ -0.53
CKS1B-202ENST00000368436 ZFAND3Q9H8U3 227 aa11.74□□□□□ -0.53
CKS1B-202ENST00000368436 TRAV2A0A0B4J234 112 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 HPGDSO60760 199 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 TMEM50AO95807 157 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 ZNF600Q6ZNG1 722 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 RPP25LQ8N5L8 163 aaKnown RBP11.73□□□□□ -0.53
CKS1B-202ENST00000368436 OR11H2Q8NH07 326 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
CKS1B-202ENST00000368436 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
CKS1B-202ENST00000368436 A0A0B4J293 547 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 M0QYG6 137 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 ST8SIA3O43173 380 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 DFFBO76075 338 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 TP53RKQ96S44 253 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 FUNDC2Q9BWH2 189 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
CKS1B-202ENST00000368436 PUS1Q9Y606 427 aaKnown RBP eCLIP11.72□□□□□ -0.53
CKS1B-202ENST00000368436 A0A1B0GU03 582 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 SNCAP37840 140 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 PIGPP57054 158 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.53
CKS1B-202ENST00000368436 VBP1P61758 197 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
CKS1B-202ENST00000368436 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-202ENST00000368436 CORTO00230 105 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 CA1P00915 261 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-202ENST00000368436 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
CKS1B-202ENST00000368436 PI3P19957 117 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 SUB1P53999 127 aaKnown RBP eCLIP11.7□□□□□ -0.54
CKS1B-202ENST00000368436 DEFB131AP59861 70 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 TMEM187Q14656 261 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 FAM24BQ8N5W8 94 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 DNAH10Q8IVF4 4471 aa11.7□□□□□ -0.54
CKS1B-202ENST00000368436 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 C3orf85A0A1B0GTC6 90 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 DEDDO75618 318 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 ATG12O94817 140 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 IFNA17P01571 189 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 PGAM2P15259 253 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 ETV6P41212 452 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 RORCP51449 518 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 AKR1C2P52895 323 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 RBMS2Q15434 407 aaKnown RBP11.69□□□□□ -0.54
CKS1B-202ENST00000368436 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
CKS1B-202ENST00000368436 FNDC4Q9H6D8 234 aaPredicted RBP11.69□□□□□ -0.54
CKS1B-202ENST00000368436 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
CKS1B-202ENST00000368436 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
CKS1B-202ENST00000368436 CLN5O75503 358 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 CD3DP04234 171 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 IFNA4P05014 189 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 TBPP20226 339 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 NPPCP23582 126 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 CRYBB3P26998 211 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
CKS1B-202ENST00000368436 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
CKS1B-202ENST00000368436 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms