RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ASCL5Q7RTU5 278 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 IGF2BP2-AS1Q96M15 143 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 PPIAL4AQ9Y536 164 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 PRRG2O14669 202 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 NUPR1O60356 82 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 CHRNB4P30926 498 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 IER3P46695 156 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 ZNF137PP52743 207 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
CD48-201ENST00000368045 OR5I1Q13606 314 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 THAP8Q8NA92 274 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 OR10W1Q8NGF6 305 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 OR10X1Q8NGY0 326 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 ZNF430Q9H8G1 570 aaPredicted RBP11.59□□□□□ -0.55
CD48-201ENST00000368045 SAP30LQ9HAJ7 183 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 TMEM106BQ9NUM4 274 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 TP53TG3Q9ULZ0 132 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 WASHC3Q9Y3C0 194 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 WDFY4Q6ZS81 3184 aa11.58□□□□□ -0.55
CD48-201ENST00000368045 A0A1B0GUS0 222 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 GRIFINA4D1Z8 144 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 SNURFLB1AK76 121 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 TNFRSF13BO14836 293 aaPredicted RBP11.58□□□□□ -0.56
CD48-201ENST00000368045 NDUFB3O43676 98 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 GATA2P23769 480 aaPredicted RBP11.58□□□□□ -0.56
CD48-201ENST00000368045 BPIFB3P59826 476 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
CD48-201ENST00000368045 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 CDC42EP3Q9UKI2 254 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 POLR3KQ9Y2Y1 108 aaPredicted RBP11.58□□□□□ -0.56
CD48-201ENST00000368045 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
CD48-201ENST00000368045 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 A0A0G2JNJ9 132 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 A0A1B0GV90 55 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 SERF1AO75920 110 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 CCL3L1P16619 93 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 MC5RP33032 325 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 LINC00310P59036 64 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 MLANAQ16655 118 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 VMA21Q3ZAQ7 101 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 BAGE3Q86Y29 109 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 BAGE2Q86Y30 109 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 DOLPP1Q86YN1 238 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 WFDC8Q8IUA0 241 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 ST6GALNAC6Q969X2 333 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 WFIKKN1Q96NZ8 548 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 Q9UFV3 132 aa11.57□□□□□ -0.56
CD48-201ENST00000368045 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 OR10J3Q5JRS4 329 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 ST6GALNAC3Q8NDV1 305 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 KAAG1Q9UBP8 84 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 CADP27708 2225 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
CD48-201ENST00000368045 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 AMY1AP04745 511 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 LGALS7P47929 136 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 BSPH1Q075Z2 132 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 IBA57Q5T440 356 aaKnown RBP11.56□□□□□ -0.56
CD48-201ENST00000368045 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 Q6ZWC4 215 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
CD48-201ENST00000368045 OR5AU1Q8NGC0 362 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
CD48-201ENST00000368045 JKAMPQ9P055 326 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 CACNA1HO95180 2353 aa11.56□□□□□ -0.56
CD48-201ENST00000368045 CGB1A6NKQ9 187 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 ZNF705FA8MVS1 300 aaPredicted RBP11.55□□□□□ -0.56
CD48-201ENST00000368045 K7EM74 188 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 FCN3O75636 299 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 THBDP07204 575 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
CD48-201ENST00000368045 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
CD48-201ENST00000368045 COL8A2P25067 703 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
CD48-201ENST00000368045 MISP3Q96FF7 219 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 FRYQ5TBA9 3013 aa11.55□□□□□ -0.56
CD48-201ENST00000368045 CELSR3Q9NYQ7 3312 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 BRS3P32247 399 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 REG1BP48304 166 aa11.54□□□□□ -0.56
CD48-201ENST00000368045 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms