RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ZNF83P51522 516 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZFP36L1Q07352 338 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TRBV10-3A0A0K0K1G6 114 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 RPP25Q9BUL9 199 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF114Q8NC26 417 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 OR8B2Q96RD0 313 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 KIF13AQ9H1H9 1805 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZNFX1Q9P2E3 1918 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 FOXF1Q12946 379 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SPANXN5Q5MJ07 72 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 METTL26Q96S19 204 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SNURFLB1AK76 121 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TEX45Q8NA69 505 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C18orf12Q96KH6 178 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PSG8Q9UQ74 426 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF716A6NP11 495 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 CD70P32970 193 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 F11RQ9Y624 299 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C4AP0C0L4 1744 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM229AB2RXF0 380 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 EFEMP2O95967 443 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 GATA3P23771 443 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 P2RY2P41231 377 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PFN4Q8NHR9 129 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SPTY2D1-AS1A0A0U1RR47 76 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM202A6NGA9 273 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PPIFP30405 207 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C6orf106Q9H6K1 298 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV8-4A0A0B4J246 113 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PEX7O00628 323 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 RUNX3Q13761 415 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM52Q8NDY8 209 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 K7ESM1 405 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 GCHFRP30047 84 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 KLRB1Q12918 225 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C1QTNF5Q9BXJ0 243 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TRGV11A0A075B6L2 103 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 FOXI3A8MTJ6 420 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 FCN3O75636 299 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 IL6RP08887 468 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 RFESDQ8TAC1 157 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C15orf61A6NNL5 157 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM243Q9BU79 118 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 hADV29S1A0JD25 119 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 TCRAP04437 139 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 SLAQ13239 276 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 TEX36Q5VZQ5 186 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.9
SYNE1-207ENST00000367255 CKS2P33552 79 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 LGALS4P56470 323 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 IGLC2P0DOY2 106 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 IGLC3P0DOY3 106 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 ADOQ96SZ5 270 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 CHCHD5Q9BSY4 110 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 SRSF3P84103 164 aaKnown RBP3.15□□□□□ -1.9
SYNE1-207ENST00000367255 Q6ZSR3 168 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 APOOQ9BUR5 198 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 UBL5Q9BZL1 73 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 WIPF3A6NGB9 483 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 BTCP35070 178 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 HOXA4Q00056 320 aaPredicted RBP3.15□□□□□ -1.9
SYNE1-207ENST00000367255 BMPERQ8N8U9 685 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 NAA38Q9BRA0 125 aaKnown RBP3.15□□□□□ -1.9
SYNE1-207ENST00000367255 CST9LQ9H4G1 147 aa3.15□□□□□ -1.9
SYNE1-207ENST00000367255 IL1F10Q8WWZ1 152 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF488Q96MN9 340 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 GRPP07492 148 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ASPHD1Q5U4P2 390 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 USMG5Q96IX5 58 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 RBM24Q9BX46 236 aaKnown RBP3.15□□□□□ -1.91
SYNE1-207ENST00000367255 PCNX2A6NKB5 2137 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 JMJD7-PLA2G4BH0Y9G9 81 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 TIMM17BO60830 172 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 SCTP09683 121 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 CD33P20138 364 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
SYNE1-207ENST00000367255 C5orf64Q2M2E5 130 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 KIRREL2Q6UWL6 708 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ST6GALNAC6Q969X2 333 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ARHGAP5-AS1Q96IT6 56 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 UPK3AO75631 287 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 CCL4L1Q8NHW4 92 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ABHD14AQ9BUJ0 271 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 KIR3DS1Q14943 382 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 MINOS1Q5TGZ0 78 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 MINOS1-NBL1R4GNA1 71 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 C9JQL5 133 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 GVQW1Q8N7I0 195 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 WDR83OSQ9Y284 106 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 DCAF12L2Q5VW00 463 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 DOCK10Q96BY6 2186 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 LDLRAD2Q5SZI1 272 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 LILRA1O75019 489 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 APELAP0DMC3 54 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 SMIM10L1P0DMW3 83 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 S100A4P26447 101 aaKnown RBP3.15□□□□□ -1.91
SYNE1-207ENST00000367255 UBE2BP63146 152 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms