RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 HSPB9Q9BQS6 159 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 SAMHD1Q9Y3Z3 626 aaKnown RBP2.01□□□□□ -2.09
RPL39-201ENST00000361575 TRBV10-2A0A0K0K1G8 114 aa2□□□□□ -2.09
RPL39-201ENST00000361575 PIRO00625 290 aa2□□□□□ -2.09
RPL39-201ENST00000361575 C1QCP02747 245 aa2□□□□□ -2.09
RPL39-201ENST00000361575 PPP1R2P41236 205 aa2□□□□□ -2.09
RPL39-201ENST00000361575 DEFA3P59666 94 aa2□□□□□ -2.09
RPL39-201ENST00000361575 CDC42P60953 191 aa2□□□□□ -2.09
RPL39-201ENST00000361575 TMEM258P61165 79 aa2□□□□□ -2.09
RPL39-201ENST00000361575 TMED2Q15363 201 aa2□□□□□ -2.09
RPL39-201ENST00000361575 TEX36Q5VZQ5 186 aa2□□□□□ -2.09
RPL39-201ENST00000361575 PPP1R2P3Q6NXS1 205 aa2□□□□□ -2.09
RPL39-201ENST00000361575 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
RPL39-201ENST00000361575 NMNAT1Q9HAN9 279 aaPredicted RBP2□□□□□ -2.09
RPL39-201ENST00000361575 FREM1Q5H8C1 2179 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 TTC21AQ8NDW8 1320 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 hCG_1818297A0A087WSY0 165 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 A8MT66 165 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 SLC22A1O15245 554 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 ZNF737O75373 536 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 TMEM155Q4W5P6 130 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 HACD4Q5VWC8 232 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 PXT1Q8NFP0 134 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 PFN4Q8NHR9 129 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 C9orf16Q9BUW7 83 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 KIFC1Q9BW19 673 aa1.99□□□□□ -2.09
RPL39-201ENST00000361575 FAM32AQ9Y421 112 aaKnown RBP1.99□□□□□ -2.09
RPL39-201ENST00000361575 STRCQ7RTU9 1775 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 BAZ2BQ9UIF8 2168 aaKnown RBP1.98□□□□□ -2.09
RPL39-201ENST00000361575 HMSDA8MTL9 139 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 RBP1P09455 135 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 SERPINB9P50453 376 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 DHRS4L2Q6PKH6 230 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 BPIFA4PQ86YQ2 179 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 BTF3L4Q96K17 158 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 DOHHQ9BU89 302 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 ARMC1Q9NVT9 282 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 ARL5AQ9Y689 179 aa1.98□□□□□ -2.09
RPL39-201ENST00000361575 COL11A1P12107 1806 aaPredicted RBP1.98□□□□□ -2.09
RPL39-201ENST00000361575 SORL1Q92673 2214 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 MICAL3Q7RTP6 2002 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 IBA57-AS1B1ANH7 110 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 CIAO1O76071 339 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 SHBGP04278 402 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 C8GP07360 202 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 TRGC1P0CF51 173 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 SMIM17P0DL12 118 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 EIF2B2P49770 351 aaKnown RBP1.97□□□□□ -2.09
RPL39-201ENST00000361575 FXYD2P54710 66 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 SPANXN3Q5MJ09 141 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 SLC36A1Q7Z2H8 476 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 CLVS1Q8IUQ0 354 aaPredicted RBP1.97□□□□□ -2.09
RPL39-201ENST00000361575 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 SLC25A40Q8TBP6 338 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 CCDC90BQ9GZT6 254 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 ENY2Q9NPA8 101 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 IL20Q9NYY1 176 aa1.97□□□□□ -2.09
RPL39-201ENST00000361575 COL5A3P25940 1745 aaPredicted RBP1.97□□□□□ -2.09
RPL39-201ENST00000361575 TOPBP1Q92547 1522 aa1.96□□□□□ -2.09
RPL39-201ENST00000361575 RP1P56715 2156 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 KIF1BO60333 1816 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 ECM29Q5VYK3 1845 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 SMARCA4P51532 1647 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 MYH7BA7E2Y1 1941 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 MEIS3P1A6NDR6 274 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 OVOL1O14753 267 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 IFNA10P01566 189 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 RELAQ04206 551 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 KRT222Q8N1A0 295 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 ZNF439Q8NDP4 499 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 MCFD2Q8NI22 146 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 PAIP2Q9BPZ3 127 aaKnown RBP1.96□□□□□ -2.1
RPL39-201ENST00000361575 PARVBQ9HBI1 364 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 BAIAP2Q9UQB8 552 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 DISP1Q96F81 1524 aa1.96□□□□□ -2.1
RPL39-201ENST00000361575 OR2B3O76000 313 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 C1QBP02746 253 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 PPIBP23284 216 aaKnown RBP1.95□□□□□ -2.1
RPL39-201ENST00000361575 NFYAP23511 347 aaPredicted RBP1.95□□□□□ -2.1
RPL39-201ENST00000361575 SRIP30626 198 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 S100A5P33763 92 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 Q6Q795 121 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 C11orf40Q8WZ69 217 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 ZNF625Q96I27 306 aaPredicted RBP1.95□□□□□ -2.1
RPL39-201ENST00000361575 CEP19Q96LK0 163 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 PHB2Q99623 299 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 OPTCQ9UBM4 332 aa1.95□□□□□ -2.1
RPL39-201ENST00000361575 BRWD1Q9NSI6 2320 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 CLDN25C9JDP6 229 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 IFI30P13284 250 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 LINC01554Q52M75 96 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 LCN15Q6UWW0 184 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 DHFR2Q86XF0 187 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
RPL39-201ENST00000361575 TMEM106AQ96A25 262 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms