RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
SQSTM1-201ENST00000360718 F6UZH7 168 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 IL3RAP26951 378 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 PRRX1P54821 245 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 PKIAP61925 76 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 RPS16P62249 146 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 PRB3Q04118 309 aaPredicted RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 OR1P1Q8NH06 330 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 OR5R1Q8NH85 324 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 GATAD1Q8WUU5 269 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 PERPQ96FX8 193 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 FASNP49327 2511 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 TSTD3H0UI37 97 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 RBFOX2O43251 390 aaKnown RBP eCLIP10.67□□□□□ -0.74e-14■■■□□ 14.6
SQSTM1-201ENST00000360718 FCGR3BO75015 233 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 RD3LP0DJH9 198 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 CD99P14209 185 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 SPINK9Q5DT21 86 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 RNASEH2CQ8TDP1 164 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
SQSTM1-201ENST00000360718 M0R1W7 72 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 ENSAO43768 121 aaKnown RBP10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 ZFP36P26651 326 aaKnown RBP10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 OPRK1P41145 380 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 DSCR9P59020 149 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 PDLIM3Q53GG5 364 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 ZNF596Q8TC21 504 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 PCGF1Q9BSM1 259 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 HEYLQ9NQ87 328 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 SVEP1Q4LDE5 3571 aa10.66□□□□□ -0.7
SQSTM1-201ENST00000360718 A0A1W2PPQ1 181 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 XKRY2A2RUG3 117 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 TYMSP04818 313 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 OR9G9P0C7N8 305 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 PAX1P15863 534 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 BTF3P20290 206 aaKnown RBP10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 ARF6P62330 175 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 LCN2P80188 198 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 REC114Q7Z4M0 266 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 C10orf105Q8TEF2 133 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 C14orf144Q96I85 54 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 IGHV2-26A0A0B4J1V2 119 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 FOXH1O75593 365 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 LMO4P61968 165 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 JOSD1Q15040 202 aaPredicted RBP10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 CST9LP1Q5W188 147 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 ZNF833PQ6ZTB9 187 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 SSX9Q7RTT3 188 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 OR4S2Q8NH73 311 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 IMMP2LQ96T52 175 aa10.65□□□□□ -0.7
SQSTM1-201ENST00000360718 GAMTQ14353 236 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 RTL8BQ17RB0 113 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 CDPF1Q6NVV7 123 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 IGHV4-30-2A0A087WSY4 118 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 DDTP30046 118 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 ACTL10Q5JWF8 245 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 Q8N7P7 452 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 DDB2Q92466 427 aa10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 AMMECR1Q9Y4X0 333 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1-201ENST00000360718 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 CXorf1O96002 111 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 GCGP01275 180 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 APOA2P02652 100 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 COX7A1P24310 79 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 VDAC2P45880 294 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 BEND2Q8NDZ0 799 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 ELOVL1Q9BW60 279 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 IGHV4-61A0A0C4DH41 118 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 AMBPP02760 352 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 NPPCP23582 126 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 PRTN3P24158 256 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 ZNF137PP52743 207 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 GNB1P62873 340 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 PNKDQ8N490 385 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 OR5T1Q8NG75 326 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 TMEM18Q96B42 140 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 NPVFQ9HCQ7 196 aa10.63□□□□□ -0.71
SQSTM1-201ENST00000360718 CELSR1Q9NYQ6 3014 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 NDUFB4O95168 129 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 IGLV1-47P01700 117 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 CT45A6P0DMU7 189 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 CT45A5P0DMU8 189 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 CT45A7P0DMV0 189 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms