RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 ACP7Q6ZNF0 438 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 PILRBQ9UKJ0 227 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 CABIN1Q9Y6J0 2220 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 ICE1Q9Y2F5 2266 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 PYYP10082 97 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 TFF2Q03403 129 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 TMEM249Q2WGJ8 235 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 CDK5RAP2Q96SN8 1893 aa11.26□□□□□ -0.61
CCDC144A-203ENST00000360495 ITGB4P16144 1822 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 A0A1W2PQF6 199 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 EVI2AP22794 236 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 PLAURQ03405 335 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 TRBV6-7A0A0A0MS04 114 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 A0A0G2JMM0 328 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 A0A1W2PPB8 328 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 A8MWP6 167 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 KIR3DP1A8MWS1 328 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 SMPXQ9UHP9 88 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 EFNB3Q15768 340 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 A0A087WV48 116 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 CD300EQ496F6 205 aaPredicted RBP11.25□□□□□ -0.61
CCDC144A-203ENST00000360495 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 CTSBP07858 339 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 IGLV3-21P80748 117 aaPredicted RBP11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 ZNF562Q6V9R5 426 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 FBLN5Q9UBX5 448 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 C9orf172C9J069 976 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 J3QW42 95 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 M0R2P5 195 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 SLC22A18ASQ8N1D0 253 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 HS3ST3B1Q9Y662 390 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 TRAV1-1A0A0B4J248 108 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 CD69Q07108 199 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 ASCL4Q6XD76 172 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 C21orf62Q9NYP8 219 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 CD5LO43866 347 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 RSPO3Q9BXY4 272 aaPredicted RBP11.24□□□□□ -0.61
CCDC144A-203ENST00000360495 CD33P20138 364 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 GFI1Q99684 422 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 ASCL2Q99929 193 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 CST9LQ9H4G1 147 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 ANKRD31Q8N7Z5 1873 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 HIST1H4AP62805 103 aaKnown RBP11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 TMEM171Q8WVE6 324 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 FBXL7Q9UJT9 491 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 MGST2Q99735 147 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 SNRNP200O75643 2136 aaKnown RBP11.23□□□□□ -0.61
CCDC144A-203ENST00000360495 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 ADCYAP1P18509 176 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 ARAP2Q8WZ64 1704 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 TNRC6CQ9HCJ0 1690 aaKnown RBP11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 COL18A1P39060 1754 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 LOC105371242A0A075B767 164 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 SLC25A20O43772 301 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 GHRHP01286 108 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 LY6EQ16553 131 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 RAMP3O60896 148 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 PAX1P15863 534 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 PRR31Q5SQ13 230 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 SNHG12Q9BXW3 62 aa11.22□□□□□ -0.61
CCDC144A-203ENST00000360495 SEC16AO15027 2179 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 C15orf61A6NNL5 157 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 NKX2-8O15522 239 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 TRGV3P03979 118 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 FOCADQ5VW36 1801 aa11.21□□□□□ -0.61
CCDC144A-203ENST00000360495 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.62
CCDC144A-203ENST00000360495 J3QRE1 110 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms