RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 IGLV2-23P01705 113 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 HMGCLL1Q8TB92 370 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 IGHV4-4A0A075B6R2 117 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 ZP1P60852 638 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 NDPQ00604 133 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 GTSF1LQ9H1H1 148 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 BRWD3Q6RI45 1802 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 LRP5O75197 1615 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 PTP4A3O75365 173 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 FGF12P61328 243 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 UBE2V2Q15819 145 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 A0A1W2PPV9 198 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 ANKRD39Q53RE8 183 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 C12orf73Q69YU5 71 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 XAF1Q6GPH4 301 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 FGFRL1Q8N441 504 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 SLC17A3O00476 420 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 CRYBA2P53672 197 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 OCIAD2Q56VL3 154 aa8.24□□□□□ -1.09
CHD3-202ENST00000358181 ZCCHC24Q8N2G6 241 aaKnown RBP8.24□□□□□ -1.09
CHD3-202ENST00000358181 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 MARCH11A6NNE9 402 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 NR2C2APQ86WQ0 139 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 KLK13Q9UKR3 277 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 SIPA1L3O60292 1781 aaPredicted RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 IGKV1OR2-108A0A075B7D4 117 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 RHOGP84095 191 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 TRAV8-3A0A0A6YYJ7 113 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 PGLYRP1O75594 196 aaPredicted RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 FGF9P31371 208 aaPredicted RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 ID3Q02535 119 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 SIGLEC15Q6ZMC9 328 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 IMMP1LQ96LU5 166 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 BCL2P10415 239 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 UCP1P25874 307 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 SSBP2P81877 361 aaPredicted RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 ZNF329Q86UD4 541 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 FAM216BQ8N7L0 139 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 SRXN1Q9BYN0 137 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
CHD3-202ENST00000358181 IGKV1D-16P01601 117 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 WNT2P09544 360 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 UQCR10Q9UDW1 63 aa8.23□□□□□ -1.09
CHD3-202ENST00000358181 THBDP07204 575 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 GATA2P23769 480 aaPredicted RBP8.22□□□□□ -1.09
CHD3-202ENST00000358181 KLRD1Q13241 179 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 PEF1Q9UBV8 284 aaKnown RBP8.22□□□□□ -1.09
CHD3-202ENST00000358181 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 Q9H3A6 140 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 CBLN4Q9NTU7 201 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 RNF114Q9Y508 228 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 CGAP01215 116 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 HSPE1P61604 102 aaKnown RBP8.22□□□□□ -1.09
CHD3-202ENST00000358181 IGHV4-28A0A0C4DH34 117 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 TFF1P04155 84 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 OR52E5Q8NH55 327 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 COQ2Q96H96 371 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 TP53BP1Q12888 1972 aaPredicted RBP8.22□□□□□ -1.09
CHD3-202ENST00000358181 ZNF146Q15072 292 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 MORN3Q6PF18 240 aaPredicted RBP8.22□□□□□ -1.09
CHD3-202ENST00000358181 LTBP4Q8N2S1 1624 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 CTDSPLO15194 276 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 FCN3O75636 299 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 PLNP26678 52 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 OR5P3Q8WZ94 311 aa8.22□□□□□ -1.09
CHD3-202ENST00000358181 ZNF729A6NN14 1252 aaPredicted RBP8.21□□□□□ -1.09
CHD3-202ENST00000358181 PLPP2O43688 288 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 IGFBP2P18065 325 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 NEUROG1Q92886 237 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 DDA1Q9BW61 102 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 RNF223E7ERA6 249 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 ZNF876PQ49A33 203 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 VMO1Q7Z5L0 202 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 MEGF9Q9H1U4 602 aa8.21□□□□□ -1.09
CHD3-202ENST00000358181 IGKV2D-24A0A075B6R9 120 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 PFN2P35080 140 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 GPX4P36969 197 aaPredicted RBP8.21□□□□□ -1.1
CHD3-202ENST00000358181 ATG4DQ86TL0 474 aaPredicted RBP8.21□□□□□ -1.1
CHD3-202ENST00000358181 KLHDC2Q9Y2U9 406 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 ZNF721Q8TF20 911 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 C10orf35Q96D05 121 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 Q96MF0 132 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 QSER1Q2KHR3 1735 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 H3BUT2 72 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 LEPROTO15243 131 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 CTAG1AP78358 180 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
CHD3-202ENST00000358181 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
CHD3-202ENST00000358181 EPDR1Q9UM22 224 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 PGPEP1LA6NFU8 196 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 H0Y980 276 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 NXPH4O95158 308 aa8.21□□□□□ -1.1
CHD3-202ENST00000358181 ZNF362Q5T0B9 420 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms