RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MRPL18Q9H0U6 180 aaKnown RBP16.67■□□□□ 0.26
COL13A1-202ENST00000357811 IGLV3-9A0A075B6K5 115 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 PLAUP00749 431 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 CD40P25942 277 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 CCL17Q92583 94 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 SERTAD4Q9NUC0 356 aa16.67■□□□□ 0.26
COL13A1-202ENST00000357811 GCGP01275 180 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 GNG4P50150 75 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF503Q96F45 646 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 HARBI1Q96MB7 349 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 MUC6Q6W4X9 2439 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 MED13LQ71F56 2210 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 DCHS2Q6V1P9 2916 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 HELTA6NFD8 242 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 SNURFLB1AK76 121 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 UPK2O00526 184 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 RTL8BQ17RB0 113 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 TDRG1Q3Y452 100 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF705AQ6ZN79 300 aaPredicted RBP16.66■□□□□ 0.26
COL13A1-202ENST00000357811 MMD2Q8IY49 270 aa16.66■□□□□ 0.26
COL13A1-202ENST00000357811 REG1AP05451 166 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 C1orf185Q5T7R7 199 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 CMTM2Q8TAZ6 248 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 NEUROG1Q92886 237 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 FAM103A1Q9BTL3 118 aaKnown RBP16.65■□□□□ 0.26
COL13A1-202ENST00000357811 TP53TG3Q9ULZ0 132 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 SLC45A2Q9UMX9 530 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 SERF1AO75920 110 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 TMEM249Q2WGJ8 235 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 ZNF788Q6ZQV5 615 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 RPUSD1Q9UJJ7 312 aaKnown RBP16.65■□□□□ 0.26
COL13A1-202ENST00000357811 PRNDQ9UKY0 176 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 ASH1LQ9NR48 2969 aaKnown RBP16.65■□□□□ 0.26
COL13A1-202ENST00000357811 IGHV3-72A0A0B4J1Y9 119 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 GGTLC3B5MD39 225 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 MT-CO2P00403 227 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 BATFQ16520 125 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 SGK494Q96LW2 274 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 IL36BQ9NZH7 164 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 IL19Q9UHD0 177 aa16.65■□□□□ 0.26
COL13A1-202ENST00000357811 RAB4AP20338 218 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 TDGF1P3P51864 188 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 LGALS4P56470 323 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 PRCDQ00LT1 54 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 BAGE3Q86Y29 109 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 BAGE2Q86Y30 109 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 ST6GALNAC3Q8NDV1 305 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 SLC25A10Q9UBX3 287 aaPredicted RBP16.64■□□□□ 0.25
COL13A1-202ENST00000357811 CRISP2P16562 243 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 IQCJQ1A5X6 159 aa16.64■□□□□ 0.25
COL13A1-202ENST00000357811 MRPL54Q6P161 138 aaKnown RBP16.64■□□□□ 0.25
COL13A1-202ENST00000357811 TNFSF4P23510 183 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 CCKARP32238 428 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 COMMD5Q9GZQ3 224 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 MALRD1Q5VYJ5 2156 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 IGHV3-21A0A0B4J1V1 117 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 A8MXE2 369 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 KLK10O43240 276 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 DLEU1O43261 78 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 FCN3O75636 299 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 PYYP10082 97 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 TOMM20LQ6UXN7 152 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 C19orf35Q6ZS72 473 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 SLC25A48Q6ZT89 311 aaKnown RBP16.63■□□□□ 0.25
COL13A1-202ENST00000357811 TBX15Q96SF7 602 aa16.63■□□□□ 0.25
COL13A1-202ENST00000357811 SSBP3Q9BWW4 388 aaPredicted RBP16.63■□□□□ 0.25
COL13A1-202ENST00000357811 POLR3KQ9Y2Y1 108 aaPredicted RBP16.63■□□□□ 0.25
COL13A1-202ENST00000357811 LINC00310P59036 64 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 C1orf174Q8IYL3 243 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 FAM169BQ8N8A8 192 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 FAM222BQ8WU58 562 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 TM4SF5O14894 197 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 DMRTA1Q5VZB9 504 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 NAGKQ9UJ70 344 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 TRAV34A0A0B4J273 112 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 PRB4P10163 310 aaPredicted RBP16.62■□□□□ 0.25
COL13A1-202ENST00000357811 CDKN1AP38936 164 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 RPEL1Q2QD12 228 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 LYPD2Q6UXB3 125 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 ADTRPQ96IZ2 230 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 HSPB9Q9BQS6 159 aa16.62■□□□□ 0.25
COL13A1-202ENST00000357811 hADV38S2A0JD32 116 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
COL13A1-202ENST00000357811 Q6ZWC4 215 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 RBMXL3Q8N7X1 1067 aaKnown RBP16.61■□□□□ 0.25
COL13A1-202ENST00000357811 NAT8BQ9UHF3 227 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 V9GYV3 84 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 GATA4P43694 442 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-202ENST00000357811 SAMD10Q9BYL1 202 aa16.61■□□□□ 0.25
COL13A1-202ENST00000357811 TECRQ9NZ01 308 aaKnown RBP16.61■□□□□ 0.25
COL13A1-202ENST00000357811 OR10X1Q8NGY0 326 aa16.6■□□□□ 0.25
COL13A1-202ENST00000357811 TXNDC17Q9BRA2 123 aa16.6■□□□□ 0.25
COL13A1-202ENST00000357811 TPSG1Q9NRR2 321 aa16.6■□□□□ 0.25
COL13A1-202ENST00000357811 RITA1Q96K30 269 aa16.6■□□□□ 0.25
COL13A1-202ENST00000357811 UBE2L3P68036 154 aaKnown RBP16.59■□□□□ 0.25
COL13A1-202ENST00000357811 TMEM200BQ69YZ2 307 aa16.59■□□□□ 0.25
COL13A1-202ENST00000357811 BTF3L4Q96K17 158 aa16.59■□□□□ 0.25
COL13A1-202ENST00000357811 YPEL3P61236 119 aaPredicted RBP16.59■□□□□ 0.25
COL13A1-202ENST00000357811 PRR27Q6MZM9 219 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms