RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 A0A1W2PS18 150 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 F2Z2F3 143 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 RNASE2P10153 161 aaKnown RBP14.44□□□□□ -0.1
RTN4-204ENST00000357732 G0S2P27469 103 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 ITLN1Q8WWA0 313 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 RPUSD1Q9UJJ7 312 aaKnown RBP14.44□□□□□ -0.1
RTN4-204ENST00000357732 DLL1O00548 723 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 CT45A6P0DMU7 189 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 CT45A5P0DMU8 189 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 CT45A7P0DMV0 189 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 SUMO1P63165 101 aaKnown RBP14.44□□□□□ -0.1
RTN4-204ENST00000357732 DSCAML1Q8TD84 2053 aa14.44□□□□□ -0.1
RTN4-204ENST00000357732 NBEAQ8NFP9 2946 aa14.43□□□□□ -0.1
RTN4-204ENST00000357732 BMPR1BO00238 502 aa14.43□□□□□ -0.1
RTN4-204ENST00000357732 KRTDAPP60985 99 aa14.43□□□□□ -0.1
RTN4-204ENST00000357732 COL5A1-AS1Q5SY13 56 aa14.43□□□□□ -0.1
RTN4-204ENST00000357732 ZNF331Q9NQX6 463 aaPredicted RBP14.43□□□□□ -0.1
RTN4-204ENST00000357732 GOLT1BQ9Y3E0 138 aa14.43□□□□□ -0.1
RTN4-204ENST00000357732 PSMB11A5LHX3 300 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 APCSP02743 223 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 FRMD6-AS1P0C7T7 363 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 PRRX1P54821 245 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 OR1L4Q8NGR5 311 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 GCM1Q9NP62 436 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 TANC2Q9HCD6 1990 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 WT1P19544 449 aaPredicted RBP14.42□□□□□ -0.1
RTN4-204ENST00000357732 SELENOVP59797 346 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 ERHP84090 104 aaKnown RBP14.42□□□□□ -0.1
RTN4-204ENST00000357732 ZNF788Q6ZQV5 615 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 ZNF833PQ6ZTB9 187 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 KLHDC1Q8N7A1 406 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 OR4A5Q8NH83 315 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 SMIM12Q96EX1 92 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 GAFA1Q96PS6 74 aa14.42□□□□□ -0.1
RTN4-204ENST00000357732 SPRY3O43610 288 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 SRIP30626 198 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 UTF1Q5T230 341 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 ALKBH2Q6NS38 261 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 FAM167A-AS1Q96KT0 104 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 LPAR2Q9HBW0 351 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 DNAJC4Q9NNZ3 241 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 ZFHX4Q86UP3 3567 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 A0A1W2PN81 502 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 hADV38S2A0JD32 116 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 APOA2P02652 100 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 ZNF83P51522 516 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 UBE2L3P68036 154 aaKnown RBP14.41□□□□□ -0.1
RTN4-204ENST00000357732 FXYD3Q14802 87 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 NDUFA4L2Q9NRX3 87 aa14.41□□□□□ -0.1
RTN4-204ENST00000357732 M0R1B8 84 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 SAA1P0DJI8 122 aaPredicted RBP14.4□□□□□ -0.1
RTN4-204ENST00000357732 MGST1P10620 155 aaKnown RBP14.4□□□□□ -0.1
RTN4-204ENST00000357732 MYOD1P15172 320 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 TNFSF4P23510 183 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 CASP6P55212 293 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 SPRNQ5BIV9 151 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 MBD6Q96DN6 1003 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 FAM103A1Q9BTL3 118 aaKnown RBP14.4□□□□□ -0.1
RTN4-204ENST00000357732 SLC25A2Q9BXI2 301 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 LINC00312Q9Y6C7 94 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 SRRM4A7MD48 611 aaKnown RBP14.4□□□□□ -0.1
RTN4-204ENST00000357732 IGKV1-16P04430 117 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 BPIFB3P59826 476 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 PMCHL1Q16048 86 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 TEX36Q5VZQ5 186 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 OR9G1Q8NH87 305 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 BDP1A6H8Y1 2624 aa14.4□□□□□ -0.1
RTN4-204ENST00000357732 USF1P22415 310 aaPredicted RBP14.39□□□□□ -0.11
RTN4-204ENST00000357732 GNG10P50151 68 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 SPATA45Q537H7 98 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 FAM71F2Q6NXP2 309 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 VSTM2AQ8TAG5 236 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 BORCS7Q96B45 105 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 GRAMD2BQ96HH9 432 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 RCHY1Q96PM5 261 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 GAL3ST2Q9H3Q3 398 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 SERTAD4Q9NUC0 356 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 CFAP47Q6ZTR5 3102 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 C20orf202A1L168 122 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 TNFAIP6P98066 277 aaPredicted RBP14.39□□□□□ -0.11
RTN4-204ENST00000357732 MEF2CQ06413 473 aaPredicted RBP14.39□□□□□ -0.11
RTN4-204ENST00000357732 KLF5Q13887 457 aaPredicted RBP14.39□□□□□ -0.11
RTN4-204ENST00000357732 TMEM177Q53S58 311 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 ATP5L2Q7Z4Y8 100 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 MOB3BQ86TA1 216 aa14.39□□□□□ -0.11
RTN4-204ENST00000357732 AMMECR1Q9Y4X0 333 aaPredicted RBP14.39□□□□□ -0.11
RTN4-204ENST00000357732 DPRXA6NFQ7 191 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 BTF3P20290 206 aaKnown RBP14.38□□□□□ -0.11
RTN4-204ENST00000357732 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.117e-16■■■□□ 18.3
RTN4-204ENST00000357732 MRPL54Q6P161 138 aaKnown RBP14.38□□□□□ -0.11
RTN4-204ENST00000357732 NIT1Q86X76 327 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 TSKUQ8WUA8 353 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 RNF114Q9Y508 228 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 IGLC2P0DOY2 106 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 IGLC3P0DOY3 106 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 PMCHP20382 165 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 GATA2P23769 480 aaPredicted RBP14.38□□□□□ -0.11
RTN4-204ENST00000357732 TCL1AP56279 114 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms