RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF114Q8NC26 417 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 AGMATQ9BSE5 352 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 DAZ1Q9NQZ3 744 aaKnown RBP7.29□□□□□ -1.24
UPF2-202ENST00000357604 RPH3ALQ9UNE2 315 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 FAM208BQ5VWN6 2430 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 IGHV7-81A0A0B4J1V7 117 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 CLN5O75503 358 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 IGF1P05019 195 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 PSMB3P49720 205 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 BPIFA4PQ86YQ2 179 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 ZNF580Q9UK33 172 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 MED12Q93074 2177 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 IL4P05112 153 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 TMEM208Q9BTX3 173 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 CRIP3Q6Q6R5 217 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 NPIPB3Q92617 1050 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 BCL2L11O43521 198 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 TOMM40O96008 361 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 B2MP61769 119 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 SLC51BQ86UW2 128 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 ST6GALNAC6Q969X2 333 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 ARV1Q9H2C2 271 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 DOK5Q9P104 306 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 DUSP14O95147 198 aaKnown RBP7.28□□□□□ -1.24
UPF2-202ENST00000357604 LINC00869P0C866 280 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 CT45A10P0DMU9 189 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 ZNF585BQ52M93 769 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 TMEM41BQ5BJD5 291 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 DSCAMO60469 2012 aa7.28□□□□□ -1.24
UPF2-202ENST00000357604 CACNA1AO00555 2505 aa7.27□□□□□ -1.24
UPF2-202ENST00000357604 RPLP1P05386 114 aaKnown RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 CD69Q07108 199 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 GAMTQ14353 236 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 GUK1Q16774 197 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 HSD17B11Q8NBQ5 300 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 RXFP4Q8TDU9 374 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 AVPP01185 164 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 KRTAP1-3Q8IUG1 177 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 DDB2Q92466 427 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 CFHR4Q92496 578 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 TRGV9Q99603 122 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 PRELID1Q9Y255 219 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 IGLV2-23P01705 113 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 CST9LP1Q5W188 147 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 STHQ8IWL8 128 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 MRPL27Q9P0M9 148 aaKnown RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 A0A096LNT2 108 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 G3V318 75 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 CDC34P49427 236 aaPredicted RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 TMEM182Q6ZP80 229 aaPredicted RBP7.27□□□□□ -1.25
UPF2-202ENST00000357604 ZNF738Q8NE65 137 aa7.27□□□□□ -1.25
UPF2-202ENST00000357604 MAP1BP46821 2468 aaKnown RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 IGHG4P01861 327 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 ZNF491Q8N8L2 437 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 LEPP41159 167 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 TFPI2P48307 235 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 BLCAPP62952 87 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 DNAJC4Q9NNZ3 241 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 NDUFB8O95169 186 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 CD28P10747 220 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 APOC4P55056 127 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 OR10G4Q8NGN3 311 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 OR10G9Q8NGN4 311 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 OR10G7Q8NGN6 311 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 RANBP2P49792 3224 aaKnown RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 XKRY2A2RUG3 117 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 SPNP16150 400 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 TMEM144Q7Z5S9 345 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 LINC01006Q8NI28 216 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 CITED2Q99967 270 aaPredicted RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 NKX6-2Q9C056 277 aaPredicted RBP7.26□□□□□ -1.25
UPF2-202ENST00000357604 ZMAT4Q9H898 229 aa7.26□□□□□ -1.25
UPF2-202ENST00000357604 C7orf66A4D0T2 115 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 FSHBP01225 129 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 CEBPGP53567 150 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 REC114Q7Z4M0 266 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 Q8N6K4 173 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 FAM213BQ8TBF2 198 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 DIDO1Q9BTC0 2240 aaKnown RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 RAI1Q7Z5J4 1906 aaPredicted RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 FCN1O00602 326 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 CXorf1O96002 111 aa7.25□□□□□ -1.25
UPF2-202ENST00000357604 S100A9P06702 114 aaKnown RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 CDX1P47902 265 aaPredicted RBP7.25□□□□□ -1.25
UPF2-202ENST00000357604 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms