RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
LINC01560-201ENST00000357412 MISP3Q96FF7 219 aa7.52□□□□□ -1.21
LINC01560-201ENST00000357412 TXN2Q99757 166 aa7.52□□□□□ -1.21
LINC01560-201ENST00000357412 NXF2Q9GZY0 626 aaKnown RBP7.52□□□□□ -1.21
LINC01560-201ENST00000357412 CSTL1Q9H114 145 aa7.52□□□□□ -1.21
LINC01560-201ENST00000357412 DNAH10Q8IVF4 4471 aa7.52□□□□□ -1.21
LINC01560-201ENST00000357412 UCP3P55916 312 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 CMC4P56277 68 aaPredicted RBP7.51□□□□□ -1.21
LINC01560-201ENST00000357412 HSPE1P61604 102 aaKnown RBP7.51□□□□□ -1.21
LINC01560-201ENST00000357412 TSPAN5P62079 268 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 IZUMO4Q1ZYL8 232 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 TOMM20LQ6UXN7 152 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 H2BFWTQ7Z2G1 175 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 LILRB2Q8N423 598 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 OR4A16Q8NH70 328 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 MRGPRFQ96AM1 343 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 SCPEP1Q9HB40 452 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 COMMD3Q9UBI1 195 aa7.51□□□□□ -1.21
LINC01560-201ENST00000357412 KLK5Q9Y337 293 aaPredicted RBP7.51□□□□□ -1.21
LINC01560-201ENST00000357412 IGKV3-7A0A075B6H7 116 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 MPTX1A8MV57 137 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 APOA1P02647 267 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 APOHP02749 345 aaPredicted RBP7.5□□□□□ -1.21
LINC01560-201ENST00000357412 S100GP29377 79 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 SNX29P2Q8IUI4 249 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 GBGT1Q8N5D6 347 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 RPP25LQ8N5L8 163 aaKnown RBP7.5□□□□□ -1.21
LINC01560-201ENST00000357412 GATAD1Q8WUU5 269 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 PHLDA1Q8WV24 401 aaPredicted RBP7.5□□□□□ -1.21
LINC01560-201ENST00000357412 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
LINC01560-201ENST00000357412 CMTM3Q96MX0 182 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 C6orf62Q9GZU0 229 aaPredicted RBP7.5□□□□□ -1.21
LINC01560-201ENST00000357412 VSIRQ9H7M9 311 aa7.5□□□□□ -1.21
LINC01560-201ENST00000357412 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 A0A087WXM4 84 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 A0A0B4J293 547 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 INS-IGF2F8WCM5 200 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 GNG7O60262 68 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 P0C879 139 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 ELK1P19419 428 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 RCVRNP35243 200 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 NCS1P62166 190 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 ERHP84090 104 aaKnown RBP7.49□□□□□ -1.21
LINC01560-201ENST00000357412 SPINK9Q5DT21 86 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 PVRIGQ6DKI7 326 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 TCF24Q7RTU0 167 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 ST8SIA2Q92186 375 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 RARRES2Q99969 163 aa7.49□□□□□ -1.21
LINC01560-201ENST00000357412 VPS13DQ5THJ4 4388 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 M0QYG6 137 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 DEDDO75618 318 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 DFFBO76075 338 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 CD5P06127 495 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 PI3P19957 117 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 NPBWR1P48145 328 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
LINC01560-201ENST00000357412 RND3P61587 244 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 VBP1P61758 197 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 LGALS9CQ6DKI2 356 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 LHFPL1Q86WI0 220 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 DUSP18Q8NEJ0 188 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 FUNDC2Q9BWH2 189 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 MS4A6AQ9H2W1 248 aa7.48□□□□□ -1.21
LINC01560-201ENST00000357412 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
LINC01560-201ENST00000357412 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC01560-201ENST00000357412 TRAV2A0A0B4J234 112 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 IGHV3-66A0A0C4DH42 116 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 A0A1B0GU03 582 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 ST8SIA3O43173 380 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 HPGDSO60760 199 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 TMEM50AO95807 157 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 PIGPP57054 158 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 DEFB131AP59861 70 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 PAFAH1B2P68402 229 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 LEMD1Q68G75 181 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 ZNF600Q6ZNG1 722 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 C11orf45Q8TAV5 145 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
LINC01560-201ENST00000357412 TP53RKQ96S44 253 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 FNDC4Q9H6D8 234 aaPredicted RBP7.47□□□□□ -1.21
LINC01560-201ENST00000357412 VCX3AQ9NNX9 186 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 MRPL36Q9P0J6 103 aaKnown RBP7.47□□□□□ -1.21
LINC01560-201ENST00000357412 KLK11Q9UBX7 282 aa7.47□□□□□ -1.21
LINC01560-201ENST00000357412 A0A0G2JRQ6 117 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 DNASE2O00115 360 aaPredicted RBP7.46□□□□□ -1.22
LINC01560-201ENST00000357412 TNFAIP8O95379 198 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 CA1P00915 261 aaPredicted RBP7.46□□□□□ -1.22
LINC01560-201ENST00000357412 CD3DP04234 171 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
LINC01560-201ENST00000357412 RNASE2P10153 161 aaKnown RBP7.46□□□□□ -1.22
LINC01560-201ENST00000357412 PGAM2P15259 253 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 SNCAP37840 140 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 ETV6P41212 452 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 MLANAQ16655 118 aa7.46□□□□□ -1.22
LINC01560-201ENST00000357412 RNASE12Q5GAN4 147 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms