RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NHSQ6T4R5 1651 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 ICE1Q9Y2F5 2266 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 RSPO4Q2I0M5 234 aaPredicted RBP10.8□□□□□ -0.68
SMC4-202ENST00000357388 SLC25A48Q6ZT89 311 aaKnown RBP10.8□□□□□ -0.68
SMC4-202ENST00000357388 NUP205Q92621 2012 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 CDCP2Q5VXM1 449 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 C2orf82Q6UX34 121 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
SMC4-202ENST00000357388 LY96Q9Y6Y9 160 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 ALS2Q96Q42 1657 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 C12orf77C9JDV5 145 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 HIST1H4AP62805 103 aaKnown RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 NRTNQ99748 197 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 CITED1Q99966 193 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 UMODP07911 640 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 MALP21145 153 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 PRTN3P24158 256 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 KLF17Q5JT82 389 aaPredicted RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 ACP7Q6ZNF0 438 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 LAGE3Q14657 143 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 PCOLCEQ15113 449 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
SMC4-202ENST00000357388 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
SMC4-202ENST00000357388 VWC2LB2RUY7 222 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 RPL39P5Q59GN2 51 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 FOXA2Q9Y261 457 aaPredicted RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 C17orf98A8MV24 154 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 DUSP14O95147 198 aaKnown RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 ZNF688P0C7X2 276 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 GTSF1LQ9H1H1 148 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 CD28P10747 220 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 BTCP35070 178 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 ABHD17AQ96GS6 310 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 TNRC6CQ9HCJ0 1690 aaKnown RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 IGHV3OR16-10A0A075B7F0 116 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 MYOD1P15172 320 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 IGLV3-21P80748 117 aaPredicted RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 AGMATQ9BSE5 352 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
SMC4-202ENST00000357388 FAM166AQ6J272 317 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
SMC4-202ENST00000357388 LRP5O75197 1615 aa10.77□□□□□ -0.68
SMC4-202ENST00000357388 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.68
SMC4-202ENST00000357388 SAA1P0DJI8 122 aaPredicted RBP10.77□□□□□ -0.68
SMC4-202ENST00000357388 LY6G6FQ5SQ64 297 aa10.77□□□□□ -0.68
SMC4-202ENST00000357388 SFTA2Q6UW10 78 aa10.77□□□□□ -0.68
SMC4-202ENST00000357388 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.68
SMC4-202ENST00000357388 IGFBP3P17936 291 aaPredicted RBP10.77□□□□□ -0.69
SMC4-202ENST00000357388 TIMP3P35625 211 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 C7orf69Q9H7B7 122 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 MYH14Q7Z406 1995 aaKnown RBP10.77□□□□□ -0.69
SMC4-202ENST00000357388 SHISA3A0PJX4 238 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 CTHRC1Q96CG8 243 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 SEPSECSQ9HD40 501 aaKnown RBP10.77□□□□□ -0.69
SMC4-202ENST00000357388 IGKV1-8A0A0C4DH67 115 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 UPK2O00526 184 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 OR9G9P0C7N8 305 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 LEAP2Q969E1 77 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 MRPL20Q9BYC9 149 aaKnown RBP10.77□□□□□ -0.69
SMC4-202ENST00000357388 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
SMC4-202ENST00000357388 TRBV6-7A0A0A0MS04 114 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 C1QCP02747 245 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 GLRX5Q86SX6 157 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 C15orf61A6NNL5 157 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 MLNRO43193 412 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 PRSS53Q2L4Q9 553 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 PPP1R27Q86WC6 154 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 SCN4AP35499 1836 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 LOC101059948A0A1B0GTJ6 334 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 CXCL1P09341 107 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 SMIM10L1P0DMW3 83 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 LHX2P50458 406 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 ID3Q02535 119 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 FAM90A2PQ658T7 463 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 SMIM10Q96HG1 83 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 SPSB2Q99619 263 aa10.76□□□□□ -0.69
SMC4-202ENST00000357388 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
SMC4-202ENST00000357388 EFEMP2O95967 443 aa10.75□□□□□ -0.69
SMC4-202ENST00000357388 FDCSPQ8NFU4 85 aa10.75□□□□□ -0.69
SMC4-202ENST00000357388 TRPM6Q9BX84 2022 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms