RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KLF14Q8TD94 323 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 FAM222BQ8WU58 562 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 MGST2Q99735 147 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRBV9A0A0B4J1U6 114 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 H0YJW9 148 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 SPINT2O43291 252 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR10J4P0C629 311 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 MGST1P10620 155 aaKnown RBP6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 RHOBP62745 196 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 SLAQ13239 276 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 UBALD2Q8IYN6 164 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZBTB34Q8NCN2 500 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 CXorf1O96002 111 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 CGAP01215 116 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 PRR31Q5SQ13 230 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 MRPL54Q6P161 138 aaKnown RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 WDR82Q6UXN9 313 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 FNDC4Q9H6D8 234 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 DUSP13Q9UII6 198 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 C7orf71A4D174 169 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 K7EN84 100 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 MYOD1P15172 320 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 GATA2P23769 480 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 ATP1A1-AS1Q5TC04 95 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 SLC25A34Q6PIV7 304 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 MMD2Q8IY49 270 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 NHLRC2Q8NBF2 726 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 HSD17B10Q99714 261 aaKnown RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 GGTLC1Q9BX51 225 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 RNASE7Q9H1E1 156 aaKnown RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 HEATR1Q9H583 2144 aaKnown RBP6.8□□□□□ -1.32
CDC42SE1-201ENST00000357235 IGHV3OR15-7A0A075B7D8 119 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 CER1O95813 267 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 MT-ND6P03923 174 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 CRYBB3P26998 211 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 CA7P43166 264 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 PSG5Q15238 335 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 PQLC2Q6ZP29 291 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 Q8N7P7 452 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 NPVFQ9HCQ7 196 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 TNCP24821 2201 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 C19orf67A6NJJ6 358 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 P0C879 139 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 STAG3L2P0CL84 134 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 SMIM17P0DL12 118 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 GCHFRP30047 84 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 RPEL1Q2QD12 228 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 UFSP1Q6NVU6 142 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 NEGR1Q7Z3B1 354 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 STPG3Q8N7X2 389 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 LRRC29Q8WV35 223 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 S1PR3Q99500 378 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 SFXN3Q9BWM7 321 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 PLEKHA3Q9HB20 300 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ST20Q9HBF5 79 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ENY2Q9NPA8 101 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ARL2-SNX15V9GYD0 113 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 CA1P00915 261 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 NPY1RP25929 384 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 SRIP30626 198 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 GNG4P50150 75 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 LGALS4P56470 323 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 EFNB3Q15768 340 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 SLC35E4Q6ICL7 350 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ACP7Q6ZNF0 438 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZNRF1Q8ND25 227 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR2Z1Q8NG97 314 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 TMEM140Q9NV12 185 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 THYN1Q9P016 225 aa6.79□□□□□ -1.32
CDC42SE1-201ENST00000357235 ARFGEF3Q5TH69 2177 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 KLRC4-KLRK1H3BQV0 150 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 HSBP1O75506 76 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 LINC00869P0C866 280 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 IGFBP2P18065 325 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 IGHV1-2P23083 117 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 DUTP33316 252 aaKnown RBP6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 OPRK1P41145 380 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 UBE2G1P62253 170 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 RPL24P83731 157 aaKnown RBP6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 GABRA6Q16445 453 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 VWC2Q2TAL6 325 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 CENPWQ5EE01 88 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 TEPPQ6URK8 271 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 MIR17HGQ75NE6 70 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 MOB3BQ86TA1 216 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZNF439Q8NDP4 499 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 CHODLQ9H9P2 273 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 CACNA1GO43497 2377 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 BDP1A6H8Y1 2624 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRGV5A0A0B4J1U4 118 aa6.78□□□□□ -1.32
CDC42SE1-201ENST00000357235 LAMTOR5O43504 91 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms