RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 LHX2P50458 406 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 GFRA1P56159 465 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 LOXL3P58215 753 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 FOXL1Q12952 345 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 GNB1LQ9BYB4 327 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 TNFSF13O75888 250 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 TIMP3P35625 211 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 PLAURQ03405 335 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 BEND2Q8NDZ0 799 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 RNASEH2CQ8TDP1 164 aaKnown RBP13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 SMIM13P0DJ93 91 aa13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 C1orf162Q8NEQ5 155 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC11-202ENST00000357207 TRAV9-2A0A087WT02 112 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 C15orf61A6NNL5 157 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 IGHV1-2P23083 117 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 DUTP33316 252 aaKnown RBP13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 TFPI2P48307 235 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 MORN2Q502X0 79 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 TRBV20OR9-2A0A075B6H5 130 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 IGHV2OR16-5A0A0B4J2B6 119 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 C1orf194Q5T5A4 169 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 FAM90A1Q86YD7 464 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 LPAR2Q9HBW0 351 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 PHLDA3Q9Y5J5 127 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 UPK2O00526 184 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR11H1Q8NG94 326 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC11-202ENST00000357207 MYLKQ15746 1914 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 DOCK8Q8NF50 2099 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 TMEM14EPQ6UXP3 125 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 CLDN16Q9Y5I7 305 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 ID1P41134 155 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 RAB9AP51151 201 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 TRAV8-6A0A0B4J262 113 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 LURAP1LQ8IV03 231 aa13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
TRAPPC11-202ENST00000357207 H7C2G1 150 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 COX6CP09669 75 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 FTH1P19P0C7X4 201 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 TREML4Q6UXN2 200 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 WDR82Q6UXN9 313 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 FDCSPQ8NFU4 85 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 FMC1Q96HJ9 113 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.32
TRAPPC11-202ENST00000357207 CCL21O00585 134 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 GGTLC1Q9BX51 225 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 MRPL20Q9BYC9 149 aaKnown RBP13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 FBXL15Q9H469 300 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 SCN5AQ14524 2016 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 TMEM42Q69YG0 159 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 Q6AWC8 147 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 C5orf24Q7Z6I8 188 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 PNKDQ8N490 385 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
TRAPPC11-202ENST00000357207 PRR19A6NJB7 356 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 PRSS2P07478 247 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 C17orf82Q86X59 251 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 TTC9CQ8N5M4 171 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 FOXI3A8MTJ6 420 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 CD69Q07108 199 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 A0A1B0GW15 77 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 A0A1W2PS18 150 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 FAM90A2PQ658T7 463 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 Q9H3A6 140 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 UBTD1Q9HAC8 227 aa13.01□□□□□ -0.33
TRAPPC11-202ENST00000357207 IGHV1-69-2A0A0G2JMI3 117 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
TRAPPC11-202ENST00000357207 FOXF2Q12947 444 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 PSMG4Q5JS54 123 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
TRAPPC11-202ENST00000357207 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 TFF1P04155 84 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
TRAPPC11-202ENST00000357207 C2orf88Q9BSF0 95 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms