RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SSPNQ14714 243 aa11.21□□□□□ -0.62
TRIM4-203ENST00000355947 ZNF718Q3SXZ3 478 aa11.21□□□□□ -0.62
TRIM4-203ENST00000355947 OR52E5Q8NH55 327 aa11.21□□□□□ -0.62
TRIM4-203ENST00000355947 UBE2G1P62253 170 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 MPDU1O75352 247 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 SELENOTP62341 195 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 DMXL2Q8TDJ6 3036 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 IGLL1P15814 213 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 ERVK11-1P61568 191 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
TRIM4-203ENST00000355947 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
TRIM4-203ENST00000355947 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
TRIM4-203ENST00000355947 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 PRRX1P54821 245 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 CX3CL1P78423 397 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 NIT1Q86X76 327 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 RBMXL3Q8N7X1 1067 aaKnown RBP11.19□□□□□ -0.62
TRIM4-203ENST00000355947 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 SPTAN1Q13813 2472 aaKnown RBP11.19□□□□□ -0.62
TRIM4-203ENST00000355947 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 GABRA6Q16445 453 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 MORN2Q502X0 79 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 C10orf55Q5SWW7 151 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 OR4S2Q8NH73 311 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 GNB1LQ9BYB4 327 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 CXXC4Q9H2H0 198 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
TRIM4-203ENST00000355947 LINC00869P0C866 280 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 SELENOVP59797 346 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 GAGE1Q13065 139 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 VWA1Q6PCB0 445 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
TRIM4-203ENST00000355947 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 HSBP1L1C9JCN9 74 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 PILRBQ9UKJ0 227 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
TRIM4-203ENST00000355947 OR4C46A6NHA9 309 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 KLRC4-KLRK1H3BQV0 150 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 TMEM164Q5U3C3 297 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 EBLN2Q6P2I7 272 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
TRIM4-203ENST00000355947 SAA2-SAA4A0A096LPE2 208 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 LNP1A1A4G5 178 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 OR2T8A6NH00 312 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MOSP00540 346 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 P0C879 139 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 SAA2P0DJI9 122 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 PSG1P11464 419 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 TAS2R45P59539 299 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 HSPE1P61604 102 aaKnown RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 FLYWCH2Q96CP2 140 aaKnown RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 SFXN3Q9BWM7 321 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 TRGV10A0A0A0MS01 117 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 ENSAO43768 121 aaKnown RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MT-ND6P03923 174 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 VDAC2P45880 294 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 CCL11P51671 97 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 Q0VG73 95 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 RAB1CQ92928 201 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 ISLRO14498 428 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 TNFSF4P23510 183 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 PEAR1Q5VY43 1037 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-203ENST00000355947 PMS2CLQ68D20 193 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 CALYQ9NYX4 217 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 SPRR3Q9UBC9 169 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 MGAQ8IWI9 3026 aa11.17□□□□□ -0.62
TRIM4-203ENST00000355947 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 M0R1B8 84 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 FXYD7P58549 80 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
TRIM4-203ENST00000355947 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 A0A087X0K7 114 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 SP1P08047 785 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 ADH4P08319 380 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
TRIM4-203ENST00000355947 Q8N976 141 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms