RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SSBP2P81877 361 aaPredicted RBP20.53■□□□□ 0.88
CLK2-201ENST00000355560 POLR3KQ9Y2Y1 108 aaPredicted RBP20.53■□□□□ 0.88
CLK2-201ENST00000355560 NUPL2O15504 423 aaKnown RBP20.52■□□□□ 0.88
CLK2-201ENST00000355560 GPX4P36969 197 aaPredicted RBP20.52■□□□□ 0.88
CLK2-201ENST00000355560 FBLN7Q53RD9 439 aa20.52■□□□□ 0.88
CLK2-201ENST00000355560 SOHLH1Q5JUK2 328 aa20.52■□□□□ 0.88
CLK2-201ENST00000355560 SRSF12Q8WXF0 261 aaKnown RBP20.52■□□□□ 0.88
CLK2-201ENST00000355560 SLC35E1Q96K37 410 aa20.52■□□□□ 0.88
CLK2-201ENST00000355560 TMPRSS5Q9H3S3 457 aa20.52■□□□□ 0.88
CLK2-201ENST00000355560 VPS13CQ709C8 3753 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 A0A1W2PPV4 95 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 IFNA1P01562 189 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 CEBPGP53567 150 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 FNDC4Q9H6D8 234 aaPredicted RBP20.51■□□□□ 0.87
CLK2-201ENST00000355560 TBL2Q9Y4P3 447 aaKnown RBP20.51■□□□□ 0.87
CLK2-201ENST00000355560 SVEP1Q4LDE5 3571 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 IGHV4-30-2A0A087WSY4 118 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 FAM74A7A6NL05 159 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 FAM74A3Q4VXF1 159 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 IQCF2Q8IXL9 164 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 CYB561D1Q8N8Q1 229 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 ZNF114Q8NC26 417 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 CLRN3Q8NCR9 226 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 NPBQ8NG41 125 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 OR2T10Q8NGZ9 312 aa20.51■□□□□ 0.87
CLK2-201ENST00000355560 TEX22C9J3V5 150 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 NDUFA3O95167 84 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 PRR20EP86478 221 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 PRR20CP86479 221 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 PRR20DP86480 221 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 PRR20BP86481 221 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 PRR20AP86496 221 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 OR2T6Q8NHC8 308 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 ACY3Q96HD9 319 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 DNASE2O00115 360 aaPredicted RBP20.5■□□□□ 0.87
CLK2-201ENST00000355560 PMS2P11Q13670 270 aa20.5■□□□□ 0.87
CLK2-201ENST00000355560 VAX2Q9UIW0 290 aa20.49■□□□□ 0.87
CLK2-201ENST00000355560 SLC45A2Q9UMX9 530 aa20.49■□□□□ 0.87
CLK2-201ENST00000355560 OR10J1P30954 320 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 RBMS3Q6XE24 437 aaKnown RBP20.48■□□□□ 0.87
CLK2-201ENST00000355560 C19orf35Q6ZS72 473 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 CNIH1O95406 144 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 SAA4P35542 130 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 TMEM88Q6PEY1 159 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 MALSU1Q96EH3 234 aa20.48■□□□□ 0.87
CLK2-201ENST00000355560 IGHV3-48P01763 117 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 MFAP2P55001 183 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 MISP3Q96FF7 219 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 LINC00869P0C866 280 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 AKIRIN2Q53H80 203 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 OR1P1Q8NH06 330 aa20.47■□□□□ 0.87
CLK2-201ENST00000355560 C5orf64Q2M2E5 130 aa20.46■□□□□ 0.87
CLK2-201ENST00000355560 PVRIGQ6DKI7 326 aa20.46■□□□□ 0.87
CLK2-201ENST00000355560 SLC35E3Q7Z769 313 aa20.46■□□□□ 0.87
CLK2-201ENST00000355560 GATA2P23769 480 aaPredicted RBP20.45■□□□□ 0.86
CLK2-201ENST00000355560 PAX8Q06710 450 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 AWAT1Q58HT5 328 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 CBLN2Q8IUK8 224 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 ABHD5Q8WTS1 349 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 AJUBAQ96IF1 538 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 SEPSECSQ9HD40 501 aaKnown RBP20.45■□□□□ 0.86
CLK2-201ENST00000355560 MANBALQ9NQG1 85 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 M0R036 132 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 PSMB3P49720 205 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 EBI3Q14213 229 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 Q8N6K4 173 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 GATAD1Q8WUU5 269 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 NPIPB3Q92617 1050 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 C20orf24Q9BUV8 137 aa20.45■□□□□ 0.86
CLK2-201ENST00000355560 PUS1Q9Y606 427 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLK2-201ENST00000355560 F11RQ9Y624 299 aaKnown RBP20.45■□□□□ 0.86
CLK2-201ENST00000355560 MEF2BQ02080 365 aaPredicted RBP20.44■□□□□ 0.86
CLK2-201ENST00000355560 MRPL36Q9P0J6 103 aaKnown RBP20.44■□□□□ 0.86
CLK2-201ENST00000355560 NCBP2LA6PVI3 153 aaKnown RBP20.44■□□□□ 0.86
CLK2-201ENST00000355560 NPFFO15130 113 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 STAG3L2P0CL84 134 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 STAG3L3P0CL85 134 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 TMEM11P17152 192 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 RHOBP62745 196 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 TMEM249Q2WGJ8 235 aa20.44■□□□□ 0.86
CLK2-201ENST00000355560 CENPVL3A0A0U1RRI6 287 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 TSPAN4O14817 238 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 ARL14EPLP0DKL9 152 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 FXYD3Q14802 87 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 ETFRF1Q6IPR1 90 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 PIP4P2Q8N4L2 257 aa20.43■□□□□ 0.86
CLK2-201ENST00000355560 SRSF8Q9BRL6 282 aaKnown RBP20.43■□□□□ 0.86
CLK2-201ENST00000355560 CSMD2Q7Z408 3487 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 CORTO00230 105 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 PAX1P15863 534 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 RND2P52198 227 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 SPATA31B1PQ5VZV4 182 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 TAGLN2P37802 199 aaKnown RBP20.42■□□□□ 0.86
CLK2-201ENST00000355560 CD81P60033 236 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 FAM90A2PQ658T7 463 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 CYP2G1PQ6ZSU1 146 aa20.42■□□□□ 0.86
CLK2-201ENST00000355560 FAM103A1Q9BTL3 118 aaKnown RBP20.42■□□□□ 0.86
CLK2-201ENST00000355560 CRYGCP07315 174 aa20.41■□□□□ 0.86
CLK2-201ENST00000355560 FAM78BQ5VT40 261 aa20.41■□□□□ 0.86
CLK2-201ENST00000355560 SPNS3Q6ZMD2 512 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms