RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 U3KQA8 63 aa10.25□□□□□ -0.77
COLCA1-201ENST00000355430 IGKV3D-15A0A087WSY6 115 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
COLCA1-201ENST00000355430 IGHV1-18A0A0C4DH31 117 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 B4DSR2 109 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 SLC25A17O43808 307 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 B3GALT5-AS1P59052 145 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 DTX1Q86Y01 620 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 ZNF738Q8NE65 137 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 OBSL1O75147 1896 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 PRSS22Q9GZN4 317 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 MAS1LP35410 378 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 SELENOTP62341 195 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 RPL30P62888 115 aaKnown RBP10.24□□□□□ -0.77
COLCA1-201ENST00000355430 Q6ZRM9 215 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 DNAJC13O75165 2243 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 BPIFA4PQ86YQ2 179 aa10.24□□□□□ -0.77
COLCA1-201ENST00000355430 MRPL32Q9BYC8 188 aaKnown RBP10.24□□□□□ -0.77
COLCA1-201ENST00000355430 ETV2O00321 342 aaPredicted RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 KIR2DL2P43627 348 aaPredicted RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 TMEM97Q5BJF2 176 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 OCC1Q8TAD7 63 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 CYYR1Q96J86 154 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 RBM14Q96PK6 669 aaKnown RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 RNASE7Q9H1E1 156 aaKnown RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 DPRXA6NFQ7 191 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 WDR82Q6UXN9 313 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 C19orf24Q9BVV8 132 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 MOSP00540 346 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 VDAC2P45880 294 aaPredicted RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 PRR30Q53SZ7 412 aaPredicted RBP10.23□□□□□ -0.77
COLCA1-201ENST00000355430 EEF1AKMT3Q96AZ1 226 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 CRIM1Q9NZV1 1036 aa10.23□□□□□ -0.77
COLCA1-201ENST00000355430 GOLGB1Q14789 3259 aaKnown RBP10.22□□□□□ -0.77
COLCA1-201ENST00000355430 A0A0G2JLM5 398 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 COTL1Q14019 142 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 LEPROTL1O95214 131 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 KCNS1Q96KK3 526 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 DERL1Q9BUN8 251 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 IFI27L2Q9H2X8 130 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 PI4KAP42356 2102 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 NPIPB11E5RHQ5 1161 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 GPX4P36969 197 aaPredicted RBP10.22□□□□□ -0.77
COLCA1-201ENST00000355430 RELBQ01201 579 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 IGF2-ASQ6U949 168 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 Q6ZS49 121 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 F5H697 171 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 ORM1P02763 201 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 PRSS1P07477 247 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 IL15RAQ13261 267 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
COLCA1-201ENST00000355430 MFAP4P55083 255 aa10.21□□□□□ -0.77
COLCA1-201ENST00000355430 KIF26AQ9ULI4 1882 aaPredicted RBP10.21□□□□□ -0.77
COLCA1-201ENST00000355430 HTN1P15515 57 aa10.21□□□□□ -0.77
COLCA1-201ENST00000355430 RSPO1Q2MKA7 263 aaPredicted RBP10.21□□□□□ -0.77
COLCA1-201ENST00000355430 ZNF672Q499Z4 452 aaPredicted RBP10.21□□□□□ -0.77
COLCA1-201ENST00000355430 MORN2Q502X0 79 aa10.21□□□□□ -0.77
COLCA1-201ENST00000355430 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
COLCA1-201ENST00000355430 MIEN1Q9BRT3 115 aa10.21□□□□□ -0.77
COLCA1-201ENST00000355430 TRAV30A0A087WSZ9 112 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 PSPNO60542 156 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 TMEM50AO95807 157 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 SRD5A1P18405 259 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 BTF3P20290 206 aaKnown RBP10.21□□□□□ -0.78
COLCA1-201ENST00000355430 TFPI2P48307 235 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 C14orf144Q96I85 54 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 CACNA1HO95180 2353 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 TRAV9-1A0A075B6T8 112 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 NDUFS8O00217 210 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.78
COLCA1-201ENST00000355430 Q6P435 159 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.78
COLCA1-201ENST00000355430 SAA2-SAA4A0A096LPE2 208 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
COLCA1-201ENST00000355430 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
COLCA1-201ENST00000355430 DUTP33316 252 aaKnown RBP10.2□□□□□ -0.78
COLCA1-201ENST00000355430 ACTL10Q5JWF8 245 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 LINC00312Q9Y6C7 94 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 TEX38Q6PEX7 206 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 EAF1Q96JC9 268 aaPredicted RBP10.2□□□□□ -0.78
COLCA1-201ENST00000355430 NEU1Q99519 415 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 UFC1Q9Y3C8 167 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 CEP250Q9BV73 2442 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 IGHV2-5P01817 119 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 UQCRFS1P47985 274 aa10.2□□□□□ -0.78
COLCA1-201ENST00000355430 FOXA3P55318 350 aaPredicted RBP10.2□□□□□ -0.78
COLCA1-201ENST00000355430 TRBV6-6A0A0A6YYG2 114 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms