RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 E9PLN8 166 aa11.02□□□□□ -0.64
SCN8A-202ENST00000355133 RHOGP84095 191 aa11.02□□□□□ -0.64
SCN8A-202ENST00000355133 VKORC1Q9BQB6 163 aa11.02□□□□□ -0.64
SCN8A-202ENST00000355133 TRAV40A0A0B4J280 105 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 DPRXA6NFQ7 191 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 TDGF1P13385 188 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 PAX1P15863 534 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 CFHR1Q03591 330 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 WFDC12Q8WWY7 111 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
SCN8A-202ENST00000355133 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-202ENST00000355133 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 SNRNP200O75643 2136 aaKnown RBP11.02□□□□□ -0.65
SCN8A-202ENST00000355133 TIMM23O14925 209 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 CD55P08174 381 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.65
SCN8A-202ENST00000355133 TCRBV4S1A1TA0A5B7 111 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 C15orf61A6NNL5 157 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-202ENST00000355133 C18orf12Q96KH6 178 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 IGHV1-46P01743 117 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 MYOD1P15172 320 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 SRD5A1P18405 259 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF319Q9P2F9 582 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 NDUFA3O95167 84 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 NTN3O00634 580 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-202ENST00000355133 FBLN7Q53RD9 439 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 PMCHL2Q9BQD1 86 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 ABCA7Q8IZY2 2146 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 TRAV14DV4A0A0A6YYC5 116 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 FOXG1P55316 489 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
SCN8A-202ENST00000355133 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
SCN8A-202ENST00000355133 HOXA5P20719 270 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM183AQ8IXX5 376 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 RNF125Q96EQ8 232 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 MTCL1Q9Y4B5 1905 aaKnown RBP11□□□□□ -0.65
SCN8A-202ENST00000355133 IGLV3-32A0A0A0MS00 114 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 PRR32B1ATL7 298 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 C3orf36Q3SXR2 165 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 ST6GALNAC3Q8NDV1 305 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 PLXNA1Q9UIW2 1896 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 H3BRM9 83 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 C14orf144Q96I85 54 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
SCN8A-202ENST00000355133 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
SCN8A-202ENST00000355133 LYPD3O95274 346 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 PYYP10082 97 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 LHFPL4Q7Z7J7 247 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 SBF2Q86WG5 1849 aa11□□□□□ -0.65
SCN8A-202ENST00000355133 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 ATP5LO75964 103 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM50AO95807 157 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 TAF1LQ8IZX4 1826 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 NR2C2APQ86WQ0 139 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 C8orf46Q8TAG6 207 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 LEPP41159 167 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 FAM131CQ96AQ9 280 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 KIR3DL3Q8N743 410 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 ANKRD36A6QL64 1941 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 BRCA1P38398 1863 aaKnown RBP10.99□□□□□ -0.65
SCN8A-202ENST00000355133 CD33P20138 364 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
SCN8A-202ENST00000355133 CTAG1AP78358 180 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 GFI1BQ5VTD9 330 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
SCN8A-202ENST00000355133 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF585BQ52M93 769 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 MALP21145 153 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 WNT2P09544 360 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 CCL1P22362 96 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF672Q499Z4 452 aaPredicted RBP10.98□□□□□ -0.65
SCN8A-202ENST00000355133 SLC25A28Q96A46 364 aa10.98□□□□□ -0.65
SCN8A-202ENST00000355133 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
SCN8A-202ENST00000355133 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 A0A0A6YYD4 124 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 CNTFRP26992 372 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 FAM209BQ5JX69 171 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF324BQ6AW86 544 aaPredicted RBP10.97□□□□□ -0.65
SCN8A-202ENST00000355133 ZNF600Q6ZNG1 722 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 TMEM219Q86XT9 240 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 TTC9CQ8N5M4 171 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
SCN8A-202ENST00000355133 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms