RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RPL30P62888 115 aaKnown RBP7.77□□□□□ -1.17
SMG6-202ENST00000354901 PSG7Q13046 419 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 SRSF6Q13247 344 aaKnown RBP7.77□□□□□ -1.17
SMG6-202ENST00000354901 EDDM3AQ14507 147 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 SRSF7Q16629 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMG6-202ENST00000354901 EBLN2Q6P2I7 272 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 SLC25A34Q6PIV7 304 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 CENPVQ7Z7K6 275 aaPredicted RBP7.77□□□□□ -1.17
SMG6-202ENST00000354901 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 ZDHHC16Q969W1 377 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 PERPQ96FX8 193 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 TRIB1Q96RU8 372 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 ATP6V0BQ99437 205 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 KCNIP1Q9NZI2 227 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 ZNF835Q9Y2P0 537 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 SPAARA0A1B0GVQ0 90 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 MLNRO43193 412 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 ARL14EPLP0DKL9 152 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 RHOGP84095 191 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 MEF2CQ06413 473 aaPredicted RBP7.77□□□□□ -1.17
SMG6-202ENST00000354901 ZNF766Q5HY98 468 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 HES3Q5TGS1 186 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 ZNF497Q6ZNH5 498 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 PKIBQ9C010 78 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
SMG6-202ENST00000354901 POLDIP2Q9Y2S7 368 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 CD24P25063 80 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 RPL8P62917 257 aaKnown RBP7.76□□□□□ -1.17
SMG6-202ENST00000354901 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 SSMEM1Q8WWF3 244 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 POLEQ07864 2286 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 C12orf77C9JDV5 145 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 ZG16O60844 167 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 ACTL6BO94805 426 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 IGHV1-2P23083 117 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 CCL11P51671 97 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
SMG6-202ENST00000354901 RPL31P62899 125 aaKnown RBP7.76□□□□□ -1.17
SMG6-202ENST00000354901 LINC00596Q86U02 117 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 NINJ1Q92982 152 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 METRNQ9UJH8 293 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 PPIAL4CA0A0B4J2A2 164 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 C17orf98A8MV24 154 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 APCSP02743 223 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 PPIAL4GP0DN37 164 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 LINC00173Q6ZV60 143 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 BHLHA15Q7RTS1 189 aaPredicted RBP7.76□□□□□ -1.17
SMG6-202ENST00000354901 GALMQ96C23 342 aa7.76□□□□□ -1.17
SMG6-202ENST00000354901 PKDREJQ9NTG1 2253 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 BMPR1BO00238 502 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 HBZP02008 142 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 SHISA2Q6UWI4 295 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 PIP4P1Q86T03 277 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 PNKDQ8N490 385 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 KLF14Q8TD94 323 aaPredicted RBP7.75□□□□□ -1.17
SMG6-202ENST00000354901 TRBV6-6A0A0A6YYG2 114 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.75□□□□□ -1.17
SMG6-202ENST00000354901 K7EN84 100 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 PDE6DO43924 150 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 ARF6P62330 175 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 FAM71F2Q6NXP2 309 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 MDS2Q8NDY4 140 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 LSM10Q969L4 123 aaKnown RBP7.75□□□□□ -1.17
SMG6-202ENST00000354901 FER1L6-AS2Q96M78 137 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 ZNF331Q9NQX6 463 aaPredicted RBP7.75□□□□□ -1.17
SMG6-202ENST00000354901 SS18L2Q9UHA2 77 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 PSG11Q9UQ72 335 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 TIMM8AO60220 97 aaPredicted RBP7.75□□□□□ -1.17
SMG6-202ENST00000354901 LGALS4P56470 323 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 Q0VG73 95 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 PQLC2Q6ZP29 291 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 DEFB125Q8N687 156 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 C5orf30Q96GV9 206 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 ARFGEF3Q5TH69 2177 aa7.75□□□□□ -1.17
SMG6-202ENST00000354901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
SMG6-202ENST00000354901 A0A1B0GW15 77 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 PRR33A8MZF0 331 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 IGLC1P0CG04 106 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 PDLIM3Q53GG5 364 aaPredicted RBP7.74□□□□□ -1.17
SMG6-202ENST00000354901 C12orf54Q6X4T0 127 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 Q6ZR03 302 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 MOB1BQ7L9L4 216 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 TMEM147Q9BVK8 224 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 NPCDR1Q9BY65 106 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 NPVFQ9HCQ7 196 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 LSM4Q9Y4Z0 139 aaKnown RBP7.74□□□□□ -1.17
SMG6-202ENST00000354901 TMEM30CPA0ZSE6 113 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 G3V4G9 280 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 NKX2-8O15522 239 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 CSN3P07498 182 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 OR10J4P0C629 311 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 ERVK11-1P61568 191 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 DYSFO75923 2080 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 TNCP24821 2201 aa7.74□□□□□ -1.17
SMG6-202ENST00000354901 HTR1DP28221 377 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms