RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TCL1AP56279 114 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 OR1L4Q8NGR5 311 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 TM4SF5O14894 197 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV3-13P01766 116 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 ASCL3Q9NQ33 180 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 AMMECR1Q9Y4X0 333 aaPredicted RBP9.31□□□□□ -0.92
CAPN9-202ENST00000354537 HCFC1P51610 2035 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 COL6A3P12111 3177 aa9.31□□□□□ -0.92
CAPN9-202ENST00000354537 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 H0YJW9 148 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 DLL1O00548 723 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 TCF21O43680 179 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 HSBP1O75506 76 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 GATA4P43694 442 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 SLAQ13239 276 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 LYG1Q8N1E2 194 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 ZNRF1Q8ND25 227 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 ALKBH7Q9BT30 221 aaPredicted RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 HINT2Q9BX68 163 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 FZR1Q9UM11 496 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 SOX21Q9Y651 276 aaPredicted RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 TET2Q6N021 2002 aaPredicted RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 NKX6-3A6NJ46 265 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 PRR33A8MZF0 331 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 K7EP13 123 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 HIST1H1EP10412 219 aaKnown RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 TNXAQ16473 311 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 C3orf36Q3SXR2 165 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 CNEP1R1Q8N9A8 125 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 ZNF738Q8NE65 137 aa9.3□□□□□ -0.92
CAPN9-202ENST00000354537 OSR1Q8TAX0 266 aaPredicted RBP9.3□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV1-69-2A0A0G2JMI3 117 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 CT45A6P0DMU7 189 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 CT45A5P0DMU8 189 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 CT45A7P0DMV0 189 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 REG1BP48304 166 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 UBE2G1P62253 170 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 SLC35B1P78383 322 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 LEMD1Q68G75 181 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 VWA1Q6PCB0 445 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 SLC25A48Q6ZT89 311 aaKnown RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 FAM19A2Q8N3H0 131 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 NUP35Q8NFH5 326 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 GAL3ST2Q9H3Q3 398 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 COX11Q9Y6N1 276 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 DIDO1Q9BTC0 2240 aaKnown RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 PEX7O00628 323 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 CRXO43186 299 aaPredicted RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 NTF3P20783 257 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 MFAP2P55001 183 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 ERHP84090 104 aaKnown RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 C1orf210Q8IVY1 113 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 MUC15Q8N387 334 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 STXBP6Q8NFX7 210 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 OR4A5Q8NH83 315 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 ZNF71Q9NQZ8 489 aaPredicted RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 TNFRSF19Q9NS68 423 aa9.29□□□□□ -0.92
CAPN9-202ENST00000354537 COLQQ9Y215 455 aaPredicted RBP9.29□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 A0A1B0GXF2 115 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 A0A1W2PN81 502 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 M0R2Z0 102 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 BPIFB3P59826 476 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
CAPN9-202ENST00000354537 CT83Q5H943 113 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
CAPN9-202ENST00000354537 OR9G1Q8NH87 305 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 FAM168AQ92567 244 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 WNT10AQ9GZT5 417 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 SLC25A15Q9Y619 301 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 IGLC7A0M8Q6 106 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 IGHV3-7P01780 117 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 MYOD1P15172 320 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 MYCNOSP40205 109 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 CA7P43166 264 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 MOGAT3Q86VF5 341 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 C9orf106Q8NAJ2 232 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 CHCHD1Q96BP2 118 aaKnown RBP9.28□□□□□ -0.92
CAPN9-202ENST00000354537 SARAFQ96BY9 339 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
CAPN9-202ENST00000354537 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 RPUSD1Q9UJJ7 312 aaKnown RBP9.28□□□□□ -0.92
CAPN9-202ENST00000354537 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
CAPN9-202ENST00000354537 CCL25O15444 150 aa9.27□□□□□ -0.93
CAPN9-202ENST00000354537 GATA2P23769 480 aaPredicted RBP9.27□□□□□ -0.93
CAPN9-202ENST00000354537 GLRXP35754 106 aa9.27□□□□□ -0.93
CAPN9-202ENST00000354537 GDF5OSQ5U4N7 250 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms