RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PLA2G2CQ5R387 149 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 MEGF9Q9H1U4 602 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 OTOGLQ3ZCN5 2332 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 MT-CO3P00414 261 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 CD46P15529 392 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 MFAP2P55001 183 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 FOXF2Q12947 444 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 TRAT1Q6PIZ9 186 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 LINC00696Q6ZRV3 163 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 KIR3DL3Q8N743 410 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 OR4S2Q8NH73 311 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 USF3Q68DE3 2245 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 A0A1W2PNU3 283 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-202ENST00000351691 PSPNO60542 156 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 ADH4P08319 380 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 CD59P13987 128 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 KIR2DS2P43631 304 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 SEC11AP67812 179 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 CLEC2AQ6UVW9 174 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 ABHD12Q8N2K0 398 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 PRR7Q8TB68 274 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 ZNF503Q96F45 646 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 PCNX2A6NKB5 2137 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 EP300Q09472 2414 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-202ENST00000351691 FREM2Q5SZK8 3169 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 G3V4G9 280 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
TRAF3-202ENST00000351691 PAX2Q02962 417 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 GABRA6Q16445 453 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 RPH3ALQ9UNE2 315 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
TRAF3-202ENST00000351691 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 CDX4O14627 284 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-202ENST00000351691 ZNHIT1O43257 154 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 CEACAM3P40198 252 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 SMIM21Q3B7S5 101 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 ERASQ7Z444 233 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 OR2T6Q8NHC8 308 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 ST6GALNAC6Q969X2 333 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 DIDO1Q9BTC0 2240 aaKnown RBP12.24□□□□□ -0.45
TRAF3-202ENST00000351691 DMXL1Q9Y485 3027 aa12.24□□□□□ -0.45
TRAF3-202ENST00000351691 FCGR3BO75015 233 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 MRPL49Q13405 166 aaKnown RBP12.23□□□□□ -0.45
TRAF3-202ENST00000351691 TBC1D28Q2M2D7 210 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-202ENST00000351691 FAM168AQ92567 244 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 CLEC5AQ9NY25 188 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 PSG11Q9UQ72 335 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 IGFBP2P18065 325 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 MDP1Q86V88 176 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 Q8TCH9 128 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 COQ2Q96H96 371 aa12.23□□□□□ -0.45
TRAF3-202ENST00000351691 SOX21Q9Y651 276 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-202ENST00000351691 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 SPINK2P20155 84 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-202ENST00000351691 GPR183P32249 361 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 GPR12P47775 334 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
TRAF3-202ENST00000351691 DUSP13Q9UII6 198 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 FOXA2Q9Y261 457 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-202ENST00000351691 TRGV5A0A0B4J1U4 118 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 GAGE10A6NGK3 116 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 C15orf61A6NNL5 157 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 LEPROTL1O95214 131 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 HIST1H1EP10412 219 aaKnown RBP12.22□□□□□ -0.45
TRAF3-202ENST00000351691 LHFPL4Q7Z7J7 247 aa12.22□□□□□ -0.45
TRAF3-202ENST00000351691 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-202ENST00000351691 HCFC1P51610 2035 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 SPINT2O43291 252 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 ACTL6BO94805 426 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 CA1P00915 261 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-202ENST00000351691 LIPFP07098 398 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 C8orf88P0DMB2 117 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 ATP5IP56385 69 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-202ENST00000351691 LINC00205P59089 165 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 AESQ08117 197 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 C3AR1Q16581 482 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 SNRNP40Q96DI7 357 aaKnown RBP12.21□□□□□ -0.45
TRAF3-202ENST00000351691 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 TMEM140Q9NV12 185 aa12.21□□□□□ -0.45
TRAF3-202ENST00000351691 KNTC1P50748 2209 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.46
TRAF3-202ENST00000351691 OR7C2O60412 319 aa12.21□□□□□ -0.46
TRAF3-202ENST00000351691 MED12LQ86YW9 2145 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms