RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SMIM10Q96HG1 83 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 DUX4L9Q6RFH8 374 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 PPP1R32Q7Z5V6 425 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 GPR146Q96CH1 333 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF646O15015 1829 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 IGKV1D-42A0A075B6H8 117 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 MPDU1O75352 247 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 REG1AP05451 166 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 GPX1P07203 203 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 TMEM222Q9H0R3 208 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 RNF115Q9Y4L5 304 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 SSBP3Q9BWW4 388 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 SVILO95425 2214 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 FAM106CPP0CH98 169 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 FCGR2BP31994 310 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 TMEM187Q14656 261 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 GUSBP1Q15486 140 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF658BQ4V348 819 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 GPR82Q96P67 336 aa9.36□□□□□ -0.91
SMARCE1-202ENST00000348513 IGKV3D-15A0A087WSY6 115 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 CEACAM18A8MTB9 384 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 CCL19Q99731 98 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 SHISA3A0PJX4 238 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 LTBRP36941 435 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 SNRNP40Q96DI7 357 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 PAXXQ9BUH6 204 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 SEC16AO15027 2179 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 FOXA3P55318 350 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 A0A0G2JK05 382 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 ZIC3O60481 467 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 MORN2Q502X0 79 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 ASPHD2Q6ICH7 369 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 UNQ9370/PRO34162Q6UXP9 181 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 OR51G1Q8NGK1 321 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
SMARCE1-202ENST00000348513 ID1P41134 155 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 PRDM14Q9GZV8 571 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 DLL3Q9NYJ7 618 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 FBXL7Q9UJT9 491 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 CEP290O15078 2479 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 TMEM229AB2RXF0 380 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 SIVA1O15304 175 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 FSTP19883 344 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 CCL20P78556 96 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 ATXN8Q156A1 80 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 CALYQ9NYX4 217 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 TOMM40O96008 361 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 CRYBA2P53672 197 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 RP1P56715 2156 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 FAM27E3Q08E93 113 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 SHISA5Q8N114 240 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 RPRMQ9NS64 109 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 FOXH1O75593 365 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 Q6ZWC4 215 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 FOXC2Q99958 501 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 CKAP5Q14008 2032 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 APC2O95996 2303 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 GCSAMQ8N6F7 178 aa9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-202ENST00000348513 IGHV3-48P01763 117 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 CSRP2Q16527 193 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 CXorf66Q5JRM2 361 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 Q6ZVH6 145 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 EGR1P18146 543 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 ABHD12Q8N2K0 398 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 PTH2Q96A98 100 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 WNT9BO14905 357 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 CRYBB3P26998 211 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 EGR4Q05215 589 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 NABP2Q9BQ15 211 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 C19orf24Q9BVV8 132 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 PLXNA1Q9UIW2 1896 aa9.33□□□□□ -0.92
SMARCE1-202ENST00000348513 PIKFYVEQ9Y2I7 2098 aa9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 PGLYRP1O75594 196 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 DNAL4O96015 105 aa9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 TMEM105Q8N8V8 129 aa9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 SFXN3Q9BWM7 321 aa9.32□□□□□ -0.92
SMARCE1-202ENST00000348513 Q0VG73 95 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms