RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PRSS1P07477 247 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
NUP50-201ENST00000347635 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 OSTCQ9NRP0 149 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 LOC389332A0A1B0GUA5 103 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 TM4SF5O14894 197 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 TDGF1P13385 188 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
NUP50-201ENST00000347635 MMDQ15546 238 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 PROK2Q9HC23 129 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 NCOR1O75376 2440 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 IGFL3Q6UXB1 125 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 MRPL37Q9BZE1 423 aaKnown RBP12.23□□□□□ -0.45
NUP50-201ENST00000347635 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 RP1P56715 2156 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 FAM157AC9JC47 383 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 MOSP00540 346 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 LIPFP07098 398 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 FOXF2Q12947 444 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 SVILO95425 2214 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 ORM1P02763 201 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 MGST2Q99735 147 aa12.23□□□□□ -0.45
NUP50-201ENST00000347635 H3BTX0 84 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 CACNG8Q8WXS5 425 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 PHF3Q92576 2039 aaKnown RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 PPIAL4CA0A0B4J2A2 164 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 UPK2O00526 184 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 FAM106CPP0CH98 169 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 PPIAL4GP0DN37 164 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 ST6GALNAC3Q8NDV1 305 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 ASXL3Q9C0F0 2248 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 TMEM189A5PLL7 270 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 MBD3L4A6NDZ8 208 aaPredicted RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 MBD3L3A6NE82 208 aaPredicted RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 MBD3L5A6NJ08 208 aaPredicted RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 DTX1Q86Y01 620 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 OR9G1Q8NH87 305 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 MBD3L2Q8NHZ7 208 aaPredicted RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 LOC105371242A0A075B767 164 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 TNFSF13O75888 250 aa12.22□□□□□ -0.45
NUP50-201ENST00000347635 RNASEH2CQ8TDP1 164 aaKnown RBP12.22□□□□□ -0.45
NUP50-201ENST00000347635 PFN1P07737 140 aaKnown RBP12.21□□□□□ -0.45
NUP50-201ENST00000347635 IGF2-ASQ6U949 168 aa12.21□□□□□ -0.45
NUP50-201ENST00000347635 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.45
NUP50-201ENST00000347635 MED12Q93074 2177 aa12.21□□□□□ -0.45
NUP50-201ENST00000347635 A0A1W2PRD5 423 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 A0A1W2PRF3 423 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 A0A1W2PRM7 423 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 LINC00473A8K010 186 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 C17orf100A8MU93 164 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 HLA-DRB1P01911 266 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.46
NUP50-201ENST00000347635 C9JCJ5 164 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.46
NUP50-201ENST00000347635 SAA1P0DJI8 122 aaPredicted RBP12.21□□□□□ -0.46
NUP50-201ENST00000347635 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.46
NUP50-201ENST00000347635 SPATA31B1PQ5VZV4 182 aa12.21□□□□□ -0.46
NUP50-201ENST00000347635 ANOS1P23352 680 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 SRSF12Q8WXF0 261 aaKnown RBP12.2□□□□□ -0.46
NUP50-201ENST00000347635 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 COMPP49747 757 aaPredicted RBP12.2□□□□□ -0.46
NUP50-201ENST00000347635 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
NUP50-201ENST00000347635 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 C15orf62A8K5M9 175 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 A8MWP6 167 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 NEU1Q99519 415 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 MRPL20Q9BYC9 149 aaKnown RBP12.2□□□□□ -0.46
NUP50-201ENST00000347635 LAMTOR2Q9Y2Q5 125 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 PRCDQ00LT1 54 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 TWIST1Q15672 202 aa12.2□□□□□ -0.46
NUP50-201ENST00000347635 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 SEPSECSQ9HD40 501 aaKnown RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 K7ERU9 68 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 NBEAP1P0C6P0 100 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 UFC1Q9Y3C8 167 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 RIF1Q5UIP0 2472 aaKnown RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 PCP4P48539 62 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 FMC1Q96HJ9 113 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 SOX21Q9Y651 276 aaPredicted RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 KIR2DL2P43627 348 aaPredicted RBP12.19□□□□□ -0.46
NUP50-201ENST00000347635 NMUP48645 174 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 TCTAP57738 103 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 TMEM116Q8NCL8 245 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 OR4A5Q8NH83 315 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 COQ2Q96H96 371 aa12.19□□□□□ -0.46
NUP50-201ENST00000347635 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 CLEC7AQ9BXN2 247 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms