RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR2T10Q8NGZ9 312 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 OR52E5Q8NH55 327 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SGMS2Q8NHU3 365 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SFRP2Q96HF1 295 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CIB3Q96Q77 187 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 GSX1Q9H4S2 264 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 MANBALQ9NQG1 85 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 FOXA2Q9Y261 457 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 CFAP46Q8IYW2 2715 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 J3QR06 171 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 NDUFB7P17568 137 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 NPY1RP25929 384 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 FXYD3Q14802 87 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 LDLRAD2Q5SZI1 272 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF841Q6ZN19 808 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 RAB1CQ92928 201 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SGK494Q96LW2 274 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 PFDN5Q99471 154 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 NPVFQ9HCQ7 196 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 IL19Q9UHD0 177 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 RPUSD1Q9UJJ7 312 aaKnown RBP4.89□□□□□ -1.63
CLCN3-201ENST00000347613 SLC45A2Q9UMX9 530 aa4.89□□□□□ -1.63
CLCN3-201ENST00000347613 IGKV1D-37A0A075B6S9 117 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 IGHV3-21A0A0B4J1V1 117 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 A0A1B0GV90 55 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF320A2RRD8 509 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 UPK2O00526 184 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 LY6HO94772 140 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 IGLV2-23P01705 113 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 RNF224P0DH78 156 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 RNASE2P10153 161 aaKnown RBP4.88□□□□□ -1.63
CLCN3-201ENST00000347613 CRYBB3P26998 211 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 S100A2P29034 98 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 COTL1Q14019 142 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 TEX38Q6PEX7 206 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 OR10G8Q8NGN5 311 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 LINC00574Q9H8X3 128 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 TP53TG5Q9Y2B4 290 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 TRGV8A0A0C4DH27 118 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 A0A1W2PN81 502 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 IFNA1P01562 189 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 MBP02144 154 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 PYYP10082 97 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 TEX36Q5VZQ5 186 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 CCL17Q92583 94 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 FAM167A-AS1Q96KT0 104 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 KCNIP2Q9NS61 270 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 PITPNC1Q9UKF7 332 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 NCOR2Q9Y618 2525 aa4.88□□□□□ -1.63
CLCN3-201ENST00000347613 VWC2LB2RUY7 222 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 PPP5D1E7EU14 171 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 SIAH2O43255 324 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TYMSP04818 313 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 OR10J1P30954 320 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 JOSD1Q15040 202 aaPredicted RBP4.87□□□□□ -1.63
CLCN3-201ENST00000347613 COA6Q5JTJ3 125 aaKnown RBP4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TEPPQ6URK8 271 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TCTEX1D1Q8N7M0 179 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 ST6GALNAC3Q8NDV1 305 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 OR4S2Q8NH73 311 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 SNIP1Q8TAD8 396 aaKnown RBP4.87□□□□□ -1.63
CLCN3-201ENST00000347613 ASCL2Q99929 193 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 NABP2Q9BQ15 211 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TCEAL7Q9BRU2 100 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 V9GYV3 84 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 FLNCQ14315 2725 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 NBPF19A0A087WUL8 3843 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TRGV10A0A0A0MS01 117 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 C17orf112F2Z3M2 114 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 H0YJW9 148 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 NDUFS8O00217 210 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 DVL1O14640 695 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 CDKN1AP38936 164 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 PSG5Q15238 335 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 ZNF833PQ6ZTB9 187 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 FAM57AQ8TBR7 257 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 SLC25A2Q9BXI2 301 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 ELOA3CA0A087WX78 387 aaPredicted RBP4.87□□□□□ -1.63
CLCN3-201ENST00000347613 FAM90A9PA6NNJ1 464 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 C22orf46C9J442 243 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 H3BTX0 84 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 CD24P25063 80 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 BMI1P35226 326 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 DLX6P56179 175 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 PRCDQ00LT1 54 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TMEM249Q2WGJ8 235 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 CORO2AQ92828 525 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 ST6GALNAC6Q969X2 333 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 SLC35D1Q9NTN3 355 aa4.87□□□□□ -1.63
CLCN3-201ENST00000347613 SLC25A10Q9UBX3 287 aaPredicted RBP4.87□□□□□ -1.63
CLCN3-201ENST00000347613 TRAV34A0A0B4J273 112 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 SHISA9B4DS77 424 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 E7EQL1 145 aa4.86□□□□□ -1.63
CLCN3-201ENST00000347613 DLL1O00548 723 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms