RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 H2BFWTQ7Z2G1 175 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 SMIM8Q96KF7 97 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 CXorf58Q96LI9 332 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 P2RX4Q99571 388 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
RAB5C-201ENST00000346213 WFDC1Q9HC57 220 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 PARP11Q9NR21 331 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.4
RAB5C-201ENST00000346213 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
RAB5C-201ENST00000346213 IGHG4P01861 327 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 PF4V1P10720 104 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 TAS2R30P59541 319 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 KRTAP10-11P60412 298 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 CX3CL1P78423 397 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 PJVKQ0ZLH3 352 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 CLCC1Q96S66 551 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 WASHC3Q9Y3C0 194 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 MED6O75586 246 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
RAB5C-201ENST00000346213 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 CRYGBP07316 175 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 NQO2P16083 231 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 UBE2KP61086 200 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 OR4S2Q8NH73 311 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
RAB5C-201ENST00000346213 H7C2Y5 167 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 S100A12P80511 92 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 FOXE3Q13461 319 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 AARDQ4LEZ3 155 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 TEX38Q6PEX7 206 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 PSENENQ9NZ42 101 aa12.49□□□□□ -0.41
RAB5C-201ENST00000346213 CA2P00918 260 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 PF4P02776 101 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SEC11BP0C7V7 166 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 IAPPP10997 89 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SULT1A1P50225 295 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 ZNF266Q14584 549 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 STX12Q86Y82 276 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 RBKSQ9H477 322 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 MFSD2BA6NFX1 497 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SLC25A17O43808 307 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 CST7O76096 145 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 OR9G9P0C7N8 305 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 CD33P20138 364 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 HOXD3P31249 432 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SULT1A2P50226 295 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 ERVK-16P61578 105 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SLC35B1P78383 322 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 ECSCRQ19T08 205 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 EIF4E3Q8N5X7 224 aaKnown RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 OR5C1Q8NGR4 320 aa12.48□□□□□ -0.41
RAB5C-201ENST00000346213 SAT2Q96F10 170 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-201ENST00000346213 TRAV41A0A0B4J266 112 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 SPP1P10451 314 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 MC5RP33032 325 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 GNB1P62873 340 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 PXDC1Q5TGL8 231 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 PDPNQ86YL7 162 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 OR1S2Q8NGQ3 325 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 OR5B12Q96R08 314 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 CACFD1Q9UGQ2 172 aa12.47□□□□□ -0.41
RAB5C-201ENST00000346213 NUDT19A8MXV4 375 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 H3BP45 60 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 DFFBO76075 338 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 ELANEP08246 267 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-201ENST00000346213 RPS16P62249 146 aaKnown RBP12.46□□□□□ -0.41
RAB5C-201ENST00000346213 DEFA5Q01523 94 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 CLINT1Q14677 625 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 COMMD1Q8N668 190 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 OR52E5Q8NH55 327 aa12.46□□□□□ -0.41
RAB5C-201ENST00000346213 CIB3Q96Q77 187 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-201ENST00000346213 TNCP24821 2201 aa12.46□□□□□ -0.42
RAB5C-201ENST00000346213 DNAH9Q9NYC9 4486 aa12.46□□□□□ -0.42
RAB5C-201ENST00000346213 I3L521 148 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
RAB5C-201ENST00000346213 LY86O95711 162 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 HRASP01112 189 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 FGF2P09038 288 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-201ENST00000346213 FHL3Q13643 280 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM14EPQ6UXP3 125 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 ATP5SQ99766 215 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms