RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 TMEM249Q2WGJ8 235 aa20.15■□□□□ 0.82
TRADD-201ENST00000345057 STPG3Q8N7X2 389 aa20.15■□□□□ 0.82
TRADD-201ENST00000345057 RARRES2Q99969 163 aa20.15■□□□□ 0.82
TRADD-201ENST00000345057 NKX6-2Q9C056 277 aaPredicted RBP20.15■□□□□ 0.82
TRADD-201ENST00000345057 LOC102723971A0A1B0GUV8 181 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 SCO1O75880 301 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 TMEM11P17152 192 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 FGF8P55075 233 aaPredicted RBP20.14■□□□□ 0.81
TRADD-201ENST00000345057 OR1L6Q8NGR2 347 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 SSMEM1Q8WWF3 244 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 C22orf15Q8WYQ4 148 aa20.14■□□□□ 0.81
TRADD-201ENST00000345057 CENPVL3A0A0U1RRI6 287 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 FCN1O00602 326 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 YIF1AO95070 293 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 MSMBP08118 114 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 PRR20EP86478 221 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 PRR20CP86479 221 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 PRR20DP86480 221 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 PRR20BP86481 221 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 PRR20AP86496 221 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 ICAM4Q14773 271 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 MANBALQ9NQG1 85 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 SLC45A2Q9UMX9 530 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 F11RQ9Y624 299 aaKnown RBP20.13■□□□□ 0.81
TRADD-201ENST00000345057 B4DSR2 109 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 NRGNQ92686 78 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 C19orf24Q9BVV8 132 aa20.13■□□□□ 0.81
TRADD-201ENST00000345057 ZFP92A6NM28 416 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 REG1AP05451 166 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 AREGP15514 252 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 GATA3P23771 443 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 CD24P25063 80 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 GUCA2BQ16661 112 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 VAX2Q9UIW0 290 aa20.12■□□□□ 0.81
TRADD-201ENST00000345057 NCBP2LA6PVI3 153 aaKnown RBP20.11■□□□□ 0.81
TRADD-201ENST00000345057 MT-CO2P00403 227 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 PSMB3P49720 205 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 RHOBP62745 196 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 SSBP2P81877 361 aaPredicted RBP20.11■□□□□ 0.81
TRADD-201ENST00000345057 LRRK2Q5S007 2527 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 RXFP4Q8TDU9 374 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 ABHD5Q8WTS1 349 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 C17orf50Q8WW18 174 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 ACY3Q96HD9 319 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 BEX4Q9NWD9 120 aaPredicted RBP20.11■□□□□ 0.81
TRADD-201ENST00000345057 NDUFS6O75380 124 aaKnown RBP20.11■□□□□ 0.81
TRADD-201ENST00000345057 FXYD3Q14802 87 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 SOHLH1Q5JUK2 328 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 ZNF562Q6V9R5 426 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 SLC35E3Q7Z769 313 aa20.11■□□□□ 0.81
TRADD-201ENST00000345057 IGHV1-69DA0A0B4J2H0 117 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 IGHV1-69P01742 117 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 SRP19P09132 144 aaKnown RBP20.1■□□□□ 0.81
TRADD-201ENST00000345057 OR10J1P30954 320 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 NANPQ8TBE9 248 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 MISP3Q96FF7 219 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 AJUBAQ96IF1 538 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 FNDC4Q9H6D8 234 aaPredicted RBP20.1■□□□□ 0.81
TRADD-201ENST00000345057 WNK2Q9Y3S1 2297 aa20.1■□□□□ 0.81
TRADD-201ENST00000345057 PAX6P26367 422 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 THAP8Q8NA92 274 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 OR2T6Q8NHC8 308 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 IGKV1OR2-108A0A075B7D4 117 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 TRAV20A0A0B4J274 112 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 CRYGCP07315 174 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 SELENOTP62341 195 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 MLANAQ16655 118 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 GCSAMLQ5JQS6 135 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 LRRC75A-AS1Q8N1F1 130 aa20.09■□□□□ 0.81
TRADD-201ENST00000345057 LINC00869P0C866 280 aa20.08■□□□□ 0.81
TRADD-201ENST00000345057 CYP2G1PQ6ZSU1 146 aa20.08■□□□□ 0.81
TRADD-201ENST00000345057 PIP4P2Q8N4L2 257 aa20.08■□□□□ 0.81
TRADD-201ENST00000345057 HMGB3O15347 200 aaKnown RBP20.07■□□□□ 0.8
TRADD-201ENST00000345057 CXorf1O96002 111 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 ATRAIDQ6UW56 229 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 STAG3L2P0CL84 134 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 STAG3L3P0CL85 134 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 CTRB1P17538 263 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 BTN1A1Q13410 526 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 CTRB2Q6GPI1 263 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 NPIPB3Q92617 1050 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 ARPC1AQ92747 370 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 RNF2Q99496 336 aa20.07■□□□□ 0.8
TRADD-201ENST00000345057 TACC2O95359 2948 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 TCRBV4S1A1TA0A5B7 111 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 DEFA4P12838 97 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 IQCF2Q8IXL9 164 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 TMEM116Q8NCL8 245 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 CLRN3Q8NCR9 226 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 C7orf69Q9H7B7 122 aa20.06■□□□□ 0.8
TRADD-201ENST00000345057 APELAP0DMC3 54 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 RND2P52198 227 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 MFAP2P55001 183 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 CX3CL1P78423 397 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 MEF2BQ02080 365 aaPredicted RBP20.05■□□□□ 0.8
TRADD-201ENST00000345057 WNT10AQ9GZT5 417 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 TRAV40A0A0B4J280 105 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 HLA-DRB1P01911 266 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 RASL11BQ9BPW5 248 aa20.05■□□□□ 0.8
TRADD-201ENST00000345057 NPIPB5A8MRT5 1133 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms