RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 LY6HO94772 140 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
CLK3-201ENST00000345005 ERVK-16P61578 105 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
CLK3-201ENST00000345005 LINC00311Q8N616 119 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 NECAP1Q8NC96 275 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 NPCDR1Q9BY65 106 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 EREGO14944 169 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 PAGE4O60829 102 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 MDKP21741 143 aaPredicted RBP10.44□□□□□ -0.74
CLK3-201ENST00000345005 C8orf46Q8TAG6 207 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 ZNF596Q8TC21 504 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 SLC25A22Q9H936 323 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 PXMP4Q9Y6I8 212 aa10.44□□□□□ -0.74
CLK3-201ENST00000345005 COL12A1Q99715 3063 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 PMS2P5A8MQ11 134 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 J3QR06 171 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 IGHV1-8P0DP01 117 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 EFNA4P52798 201 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 TMEM144Q7Z5S9 345 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 OR9G1Q8NH87 305 aa10.43□□□□□ -0.74
CLK3-201ENST00000345005 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
CLK3-201ENST00000345005 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 A0A1W2PPV4 95 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 SCGB1D1O95968 90 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 RBP4P02753 201 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 PPIAL4GP0DN37 164 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 CDKN1AP38936 164 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 YPEL3P61236 119 aaPredicted RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 RPL15P61313 204 aaKnown RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 OR10X1Q8NGY0 326 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 PATZ1Q9HBE1 687 aaKnown RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 A0A0U1RQK1 487 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 ZNF320A2RRD8 509 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 MT-CO2P00403 227 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 SNRPCP09234 159 aaKnown RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 CT45A6P0DMU7 189 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 CT45A5P0DMU8 189 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 CT45A7P0DMV0 189 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 RTL8BQ17RB0 113 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 COX19Q49B96 90 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 ABHD12Q8N2K0 398 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 C11orf42Q8N5U0 333 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 TNFRSF14Q92956 283 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 TMEM186Q96B77 213 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 TMEM133Q9H2Q1 129 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 NAGKQ9UJ70 344 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 LY96Q9Y6Y9 160 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 TET2Q6N021 2002 aaPredicted RBP10.42□□□□□ -0.74
CLK3-201ENST00000345005 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
CLK3-201ENST00000345005 DCHS2Q6V1P9 2916 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 IL3RAP26951 378 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 OPRK1P41145 380 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 GPR6P46095 362 aaPredicted RBP10.41□□□□□ -0.74
CLK3-201ENST00000345005 PRRX1P54821 245 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 TPPP2P59282 170 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 OR4A16Q8NH70 328 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 MS4A10Q96PG2 267 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 C20orf144Q9BQM9 153 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 WDR83OSQ9Y284 106 aa10.41□□□□□ -0.74
CLK3-201ENST00000345005 FLNCQ14315 2725 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 TRBV9A0A0B4J1U6 114 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 J3QKU1 62 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 CXorf1O96002 111 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 LIPFP07098 398 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 ESDP10768 282 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 G0S2P27469 103 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 SELENOTP62341 195 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 FAM78BQ5VT40 261 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 LY6G5BQ8NDX9 201 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 OR52E5Q8NH55 327 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 SLC35D1Q9NTN3 355 aa10.4□□□□□ -0.74
CLK3-201ENST00000345005 ASH1LQ9NR48 2969 aaKnown RBP10.4□□□□□ -0.74
CLK3-201ENST00000345005 OVOL3O00110 214 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 APOA2P02652 100 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 OR9G9P0C7N8 305 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 CD1BP29016 333 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 ZNF137PP52743 207 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 POU2AF1Q16633 256 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.75
CLK3-201ENST00000345005 TMEM140Q9NV12 185 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 ZNRD1Q9P1U0 126 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 MYO18BQ8IUG5 2567 aa10.4□□□□□ -0.75
CLK3-201ENST00000345005 SPTAN1Q13813 2472 aaKnown RBP10.39□□□□□ -0.75
CLK3-201ENST00000345005 NDUFS7O75251 213 aa10.39□□□□□ -0.75
CLK3-201ENST00000345005 CST9LP1Q5W188 147 aa10.39□□□□□ -0.75
CLK3-201ENST00000345005 OR5AN1Q8NGI8 311 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms