RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 HLA-DRB1P01911 266 aa16.71■□□□□ 0.27
SOX12-201ENST00000342665 RPL13AP40429 203 aaKnown RBP16.71■□□□□ 0.27
SOX12-201ENST00000342665 FOXA3P55318 350 aaPredicted RBP16.71■□□□□ 0.27
SOX12-201ENST00000342665 HEPN1Q6WQI6 88 aa16.71■□□□□ 0.27
SOX12-201ENST00000342665 C1orf147Q96MC9 270 aaPredicted RBP16.71■□□□□ 0.27
SOX12-201ENST00000342665 PIMREGQ9BSJ6 248 aa16.71■□□□□ 0.27
SOX12-201ENST00000342665 TMEM133Q9H2Q1 129 aa16.71■□□□□ 0.27
SOX12-201ENST00000342665 C21orf62Q9NYP8 219 aa16.71■□□□□ 0.27
SOX12-201ENST00000342665 IGKV1D-33P01593 117 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 IGKV1-33P01594 117 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 PDLIM4P50479 330 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 ATP5J2P56134 94 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 CX3CL1P78423 397 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 EBLN2Q6P2I7 272 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 EEF1AKMT3Q96AZ1 226 aa16.71■□□□□ 0.26
SOX12-201ENST00000342665 A0A1W2PRE2 83 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 C1QTNF9P0C862 333 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 BTF3P20290 206 aaKnown RBP16.7■□□□□ 0.26
SOX12-201ENST00000342665 TMEM14EPQ6UXP3 125 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 REC114Q7Z4M0 266 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 C5orf24Q7Z6I8 188 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 GLRX5Q86SX6 157 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 DYNLRB2Q8TF09 96 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 GPR82Q96P67 336 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 CBLN4Q9NTU7 201 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 Q6P435 159 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 ZNF841Q6ZN19 808 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 AP5S1Q9NUS5 200 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 FOXA2Q9Y261 457 aaPredicted RBP16.7■□□□□ 0.26
SOX12-201ENST00000342665 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.7■□□□□ 0.26
SOX12-201ENST00000342665 EFNB3Q15768 340 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 SLC25A34Q6PIV7 304 aa16.7■□□□□ 0.26
SOX12-201ENST00000342665 HINT1P49773 126 aaPredicted RBP16.69■□□□□ 0.26
SOX12-201ENST00000342665 FAM106AQ4KMX7 169 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 C2orf83Q53S99 150 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 COLCA1Q6ZS62 124 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 RPP25LQ8N5L8 163 aaKnown RBP16.69■□□□□ 0.26
SOX12-201ENST00000342665 RNASE6Q93091 150 aaKnown RBP16.69■□□□□ 0.26
SOX12-201ENST00000342665 TMEM242Q9NWH2 141 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 RPL24P83731 157 aaKnown RBP16.69■□□□□ 0.26
SOX12-201ENST00000342665 USF3Q68DE3 2245 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 DPRXA6NFQ7 191 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BKO60814 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BJP06899 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BOP23527 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BBP33778 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BDP58876 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BCP62807 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST2H2BEQ16778 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.69■□□□□ 0.26
SOX12-201ENST00000342665 TMEM170AQ8WVE7 144 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BHQ93079 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BNQ99877 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 HIST1H2BMQ99879 126 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 SLC25A15Q9Y619 301 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 TFPI2P48307 235 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 TREML4Q6UXN2 200 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 TEX45Q8NA69 505 aa16.69■□□□□ 0.26
SOX12-201ENST00000342665 TRBV24-1A0A075B6N3 115 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 SELLP14151 372 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 GCSAMLQ5JQS6 135 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 PPP1R27Q86WC6 154 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 ATG101Q9BSB4 218 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 MED13LQ71F56 2210 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 WNT10AQ9GZT5 417 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 DLX1P56177 255 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 DLX6P56179 175 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 PHLDA3Q9Y5J5 127 aa16.68■□□□□ 0.26
SOX12-201ENST00000342665 SOX21Q9Y651 276 aaPredicted RBP16.68■□□□□ 0.26
SOX12-201ENST00000342665 SOD3P08294 240 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 FBXL7Q9UJT9 491 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 ZNF257Q9Y2Q1 563 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.67■□□□□ 0.26
SOX12-201ENST00000342665 A0A1B0GUT8 65 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 SIAH2O43255 324 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 GGTLC1Q9BX51 225 aa16.67■□□□□ 0.26
SOX12-201ENST00000342665 IGHG3P01860 377 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 OCC1Q8TAD7 63 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 S4R3C0 116 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 CD177Q8N6Q3 437 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 FMC1Q96HJ9 113 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 OSTCQ9NRP0 149 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 ATXN7O15265 892 aaPredicted RBP16.66■□□□□ 0.26
SOX12-201ENST00000342665 STAG3L2P0CL84 134 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 STAG3L3P0CL85 134 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 LY6EQ16553 131 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 RPP21Q9H633 154 aaKnown RBP16.66■□□□□ 0.26
SOX12-201ENST00000342665 UBE2CO00762 179 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 ARPC1AQ92747 370 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 VKORC1Q9BQB6 163 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 TMEM70Q9BUB7 260 aa16.66■□□□□ 0.26
SOX12-201ENST00000342665 TBL2Q9Y4P3 447 aaKnown RBP16.66■□□□□ 0.26
SOX12-201ENST00000342665 TCRBV4S1A1TA0A5B7 111 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 ANAPC10Q9UM13 185 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 PLXND1Q9Y4D7 1925 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 IGHV3OR16-13A0A075B7E8 117 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 IGHV3-74A0A0B4J1X5 117 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 FOXI3A8MTJ6 420 aaPredicted RBP16.65■□□□□ 0.26
SOX12-201ENST00000342665 SNCGO76070 127 aa16.65■□□□□ 0.26
SOX12-201ENST00000342665 ATOH7Q8N100 152 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms