RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SIGLEC5O15389 551 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 SAP30O75446 220 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 MALP21145 153 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 SCGB3A1Q96QR1 104 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 COL5A1-AS1Q5SY13 56 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 OR5AN1Q8NGI8 311 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 DEFB121Q5J5C9 76 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 ACACAQ13085 2346 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 VENTXO95231 258 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 ZNF585BQ52M93 769 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
UBE3B-202ENST00000342494 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 TNFRSF14Q92956 283 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 C15orf61A6NNL5 157 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-202ENST00000342494 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 TRAV41A0A0B4J266 112 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 RIF1Q5UIP0 2472 aaKnown RBP12.5□□□□□ -0.41
UBE3B-202ENST00000342494 PIKFYVEQ9Y2I7 2098 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 ZP1P60852 638 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 UBE2DNLQ8IWF7 75 aa12.5□□□□□ -0.41
UBE3B-202ENST00000342494 PAX8Q06710 450 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
UBE3B-202ENST00000342494 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 CBLN1P23435 193 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 RTBDNQ9BSG5 229 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-202ENST00000342494 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 TMEM42Q69YG0 159 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 LYZL4Q96KX0 146 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 SOX21Q9Y651 276 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-202ENST00000342494 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 CRPP02741 224 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 Q6AWC8 147 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 ST6GALNAC3Q8NDV1 305 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 ASCL2Q99929 193 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 UQCR10Q9UDW1 63 aa12.49□□□□□ -0.41
UBE3B-202ENST00000342494 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 SHISA3A0PJX4 238 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 ATP5LO75964 103 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 CD8AP01732 235 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 TMEM219Q86XT9 240 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 VGLL1Q99990 258 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 HOXA5P20719 270 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-202ENST00000342494 CNTFRP26992 372 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 DPH3P1Q9H4G8 78 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 ALPK2Q86TB3 2170 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 HEATR5BQ9P2D3 2071 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 Q5BKY6 102 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
UBE3B-202ENST00000342494 SLC17A3O00476 420 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 APOHP02749 345 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-202ENST00000342494 FOXG1P55316 489 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-202ENST00000342494 Q9UFV3 132 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 RBBP6Q7Z6E9 1792 aaKnown RBP12.47□□□□□ -0.41
UBE3B-202ENST00000342494 CACNA1BQ00975 2339 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 IGHV2-26A0A0B4J1V2 119 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 SRD5A1P18405 259 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 FBLN7Q53RD9 439 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 TRAV21A0A0B4J279 112 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 ATP5G3P48201 142 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 GGNQ86UU5 652 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
UBE3B-202ENST00000342494 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-202ENST00000342494 NCOR1O75376 2440 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 A0A1B0GW15 77 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 CD33P20138 364 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
UBE3B-202ENST00000342494 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 IL36BQ9NZH7 164 aa12.46□□□□□ -0.41
UBE3B-202ENST00000342494 IGKV1-9A0A0C4DH69 117 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 TMEM50AO95807 157 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 H3BUX3 64 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 CCL1P22362 96 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 BRD3OSQ6XYD6 125 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 ZNF525Q8N782 197 aa12.46□□□□□ -0.42
UBE3B-202ENST00000342494 GTF3AQ92664 365 aaKnown RBP12.46□□□□□ -0.42
UBE3B-202ENST00000342494 MTCL1Q9Y4B5 1905 aaKnown RBP12.46□□□□□ -0.42
UBE3B-202ENST00000342494 RAMP3O60896 148 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms