RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SAA2P0DJI9 122 aaPredicted RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 LCN12Q6JVE5 192 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF114Q8NC26 417 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 FGF23Q9GZV9 251 aaPredicted RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 PPIAL4AQ9Y536 164 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 U3KQA8 63 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 PTPN13Q12923 2485 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 GSX1Q9H4S2 264 aaPredicted RBP10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 ISLRO14498 428 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 IQCF6A8MYZ5 107 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 CRYABP02511 175 aaKnown RBP10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF146Q15072 292 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 HILPDAQ9Y5L2 63 aa10.32□□□□□ -0.76
SNRNP48-201ENST00000342415 TMEM265A0A087WTH1 108 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 LEPROTL1O95214 131 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 PMCHL1Q16048 86 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 OR8B3Q8NGG8 313 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 PERPQ96FX8 193 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 RASL11BQ9BPW5 248 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 PPIAL4EA0A075B759 164 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 IGHV3OR16-8A0A075B7F1 116 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 C15orf62A8K5M9 175 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 PPIAL4DF5H284 164 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 MLNRO43193 412 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 HYPMO75409 117 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 PPIAL4FP0DN26 164 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 COLCA1Q6ZS62 124 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 MGST2Q99735 147 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 IDI2-AS1Q9NZ38 188 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 IGKV3-7A0A075B6H7 116 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 AMY1AP04745 511 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 TCF24Q7RTU0 167 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 YTHDF2Q9Y5A9 579 aaKnown RBP10.31□□□□□ -0.76
SNRNP48-201ENST00000342415 A8MWL6 223 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 PPIHO43447 177 aaKnown RBP10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 WDR86Q86TI4 376 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 TLN1Q9Y490 2541 aaKnown RBP10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 A8MWP6 167 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 COX19Q49B96 90 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 IGF2RP11717 2491 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF785A8K8V0 405 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 RPL27AP46776 148 aaKnown RBP10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 ELOVL5Q9NYP7 299 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 CHD9Q3L8U1 2897 aa10.3□□□□□ -0.76
SNRNP48-201ENST00000342415 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 GNG7O60262 68 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNF430Q9H8G1 570 aaPredicted RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 PRSS1P07477 247 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 STAG3L2P0CL84 134 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 STAG3L3P0CL85 134 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 ACP1P24666 158 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 MRPL20Q9BYC9 149 aaKnown RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 ORM1P02763 201 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 MIEN1Q9BRT3 115 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 MCRIP2Q9BUT9 160 aaKnown RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 VCANP13611 3396 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 DLL1O00548 723 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 SAA1P0DJI8 122 aaPredicted RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 IFI27L2Q9H2X8 130 aa10.29□□□□□ -0.76
SNRNP48-201ENST00000342415 C16orf97H3BN30 126 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 Q6ZPA2 131 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 GCSAMQ8N6F7 178 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 KBTBD11-OT1A0A1B0GTJ5 212 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 CGB1A6NKQ9 187 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 CDKN1AP38936 164 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 NMUP48645 174 aa10.28□□□□□ -0.76
SNRNP48-201ENST00000342415 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms