RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 RSG1Q9BU20 258 aa10.9□□□□□ -0.66
PMS1-201ENST00000342075 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
PMS1-201ENST00000342075 FAM181BA6NEQ2 426 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 OPRK1P41145 380 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 BAXQ07812 192 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 C2orf83Q53S99 150 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 ZNF329Q86UD4 541 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 OR5R1Q8NH85 324 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 ATP5SQ99766 215 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.67
PMS1-201ENST00000342075 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
PMS1-201ENST00000342075 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
PMS1-201ENST00000342075 EXOSC2Q13868 293 aaKnown RBP10.89□□□□□ -0.67
PMS1-201ENST00000342075 RBMS3Q6XE24 437 aaKnown RBP10.89□□□□□ -0.67
PMS1-201ENST00000342075 TMED6Q8WW62 240 aa10.89□□□□□ -0.67
PMS1-201ENST00000342075 FANCD2OSQ96PS1 177 aa10.89□□□□□ -0.67
PMS1-201ENST00000342075 TENM1Q9UKZ4 2725 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 IGKV1OR2-108A0A075B7D4 117 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 RAB11AP62491 216 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 TEX261Q6UWH6 196 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 ZNF355PQ9NSJ1 428 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 CDC42EP3Q9UKI2 254 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 INS-IGF2F8WCM5 200 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 OR2J3O76001 311 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 IGHG2P01859 326 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 HBG1P69891 147 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 HBG2P69892 147 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 SLC51BQ86UW2 128 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 ACY3Q96HD9 319 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 ZNF702PQ9H963 129 aa10.88□□□□□ -0.67
PMS1-201ENST00000342075 GAMTQ14353 236 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 MFSD2BA6NFX1 497 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 MT-CO2P00403 227 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 RPP30P78346 268 aaKnown RBP10.87□□□□□ -0.67
PMS1-201ENST00000342075 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 ZNF680Q8NEM1 530 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
PMS1-201ENST00000342075 STPG2Q8N412 459 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 TTC9CQ8N5M4 171 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 ZNF114Q8NC26 417 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 UQCC1Q9NVA1 299 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 CACFD1Q9UGQ2 172 aa10.87□□□□□ -0.67
PMS1-201ENST00000342075 ATRQ13535 2644 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 TRIM77I1YAP6 450 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 NDUFB8O95169 186 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 ATP6V0CP27449 155 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 CD69Q07108 199 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 SLC16A13Q7RTY0 426 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 UBAC2Q8NBM4 344 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 KLK15Q9H2R5 256 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 K7EIM0 57 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 CRYGCP07315 174 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 FOSL1P15407 271 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 FGF7P21781 194 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 FHITP49789 147 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 AKR1C1Q04828 323 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 C19orf54Q5BKX5 351 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 TMEM182Q6ZP80 229 aaPredicted RBP10.86□□□□□ -0.67
PMS1-201ENST00000342075 TMEM147Q9BVK8 224 aa10.86□□□□□ -0.67
PMS1-201ENST00000342075 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 TEX46H3BTG2 121 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 M0QZK8 103 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 C16orf82Q7Z2V1 217 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 WDR61Q9GZS3 305 aaKnown RBP10.85□□□□□ -0.67
PMS1-201ENST00000342075 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 I3L2K1 104 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 TAAR5O14804 337 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 RND2P52198 227 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 STOML3Q8TAV4 291 aa10.85□□□□□ -0.67
PMS1-201ENST00000342075 JTBO76095 146 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
PMS1-201ENST00000342075 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
PMS1-201ENST00000342075 SCARB1Q8WTV0 552 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 MGST2Q99735 147 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 GON7Q9BXV9 100 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 IGF1P05019 195 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 ELLP55199 621 aaPredicted RBP10.84□□□□□ -0.67
PMS1-201ENST00000342075 UBA52P62987 128 aaKnown RBP10.84□□□□□ -0.67
PMS1-201ENST00000342075 VWC2Q2TAL6 325 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 AKIRIN2Q53H80 203 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 GCSAMLQ5JQS6 135 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 BTNL8Q6UX41 500 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
PMS1-201ENST00000342075 ZNF90Q03938 601 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 ZNF266Q14584 549 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 PVRIGQ6DKI7 326 aa10.84□□□□□ -0.67
PMS1-201ENST00000342075 FAM110DQ8TAY7 271 aaPredicted RBP10.84□□□□□ -0.67
PMS1-201ENST00000342075 BORCS7-ASMTA0A0B4J1R7 106 aa10.83□□□□□ -0.68
PMS1-201ENST00000342075 DLK1P80370 383 aa10.83□□□□□ -0.68
PMS1-201ENST00000342075 RHOGP84095 191 aa10.83□□□□□ -0.68
PMS1-201ENST00000342075 Q6ZSV7 163 aa10.83□□□□□ -0.68
PMS1-201ENST00000342075 GINS3Q9BRX5 216 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms