RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
RTN3-203ENST00000341307 NKX2-8O15522 239 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 DNPH1O43598 174 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 HIST1H1EP10412 219 aaKnown RBP9.8□□□□□ -0.84
RTN3-203ENST00000341307 LINC00173Q6ZV60 143 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 MTURNQ8N3F0 131 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 OR2T6Q8NHC8 308 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 CCL28Q9NRJ3 127 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 KALRNO60229 2985 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 VWC2LB2RUY7 222 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 M0R135 149 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 SPRY1O43609 319 aaPredicted RBP9.8□□□□□ -0.84
RTN3-203ENST00000341307 CLDN14O95500 239 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 APCSP02743 223 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 ZNF32P17041 273 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 WT1P19544 449 aaPredicted RBP9.8□□□□□ -0.84
RTN3-203ENST00000341307 MEOX1P50221 254 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 TUSC5Q8IXB3 177 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 ZNF799Q96GE5 643 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 FOXB1Q99853 325 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
RTN3-203ENST00000341307 B4GALT7Q9UBV7 327 aa9.8□□□□□ -0.84
RTN3-203ENST00000341307 PRRC2CQ9Y520 2896 aaKnown RBP9.79□□□□□ -0.84
RTN3-203ENST00000341307 SYS1-DBNDD2H3BUS1 97 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 SNAI2O43623 268 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 SP1P08047 785 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 FOXG1P55316 489 aaPredicted RBP9.79□□□□□ -0.84
RTN3-203ENST00000341307 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 PIGYQ3MUY2 71 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 COX19Q49B96 90 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
RTN3-203ENST00000341307 RNF183Q96D59 192 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 DEFB127Q9H1M4 99 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 CACNA1GO43497 2377 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 ZFYVE26Q68DK2 2539 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 SH2D7A6NKC9 451 aaPredicted RBP9.79□□□□□ -0.84
RTN3-203ENST00000341307 FABP6P51161 128 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 TCL1AP56279 114 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 TMEM14EPQ6UXP3 125 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 ADAMTSL5Q6ZMM2 481 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 MDS2Q8NDY4 140 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 CLCF1Q9UBD9 225 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 HILPDAQ9Y5L2 63 aa9.79□□□□□ -0.84
RTN3-203ENST00000341307 A0A096LPE4 126 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 A0A1W2PPZ6 126 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 SYNGR3O43761 229 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 APOA2P02652 100 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 PDCD1Q15116 288 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 NPCDR1Q9BY65 106 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
RTN3-203ENST00000341307 PIGLQ9Y2B2 252 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 DNAJC13O75165 2243 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 BSNQ9UPA5 3926 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 FREM1Q5H8C1 2179 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 TRAV38-1A0A0B4J264 116 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 A6NDN8 102 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 MRPL33O75394 65 aaKnown RBP9.78□□□□□ -0.84
RTN3-203ENST00000341307 PGLYRP1O75594 196 aaPredicted RBP9.78□□□□□ -0.84
RTN3-203ENST00000341307 IGLV3-1P01715 115 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 ATP5G2Q06055 141 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
RTN3-203ENST00000341307 OR8B8Q15620 311 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 KCNIP1Q9NZI2 227 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
RTN3-203ENST00000341307 ISLRO14498 428 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 KLK10O43240 276 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 DHRS3O75911 302 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 COX8AP10176 69 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 PSG2P11465 335 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 CCL2P13500 99 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 CRYGSP22914 178 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 ZNF585BQ52M93 769 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 ZNF418Q8TF45 676 aaPredicted RBP9.77□□□□□ -0.85
RTN3-203ENST00000341307 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.85
RTN3-203ENST00000341307 MS4A6AQ9H2W1 248 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 PTPRQQ9UMZ3 2332 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 F2RP25116 425 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 CCL11P51671 97 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 RPL31P62899 125 aaKnown RBP9.77□□□□□ -0.85
RTN3-203ENST00000341307 FA2HQ7L5A8 372 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 SPTSSAQ969W0 71 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 PRRG4Q9BZD6 226 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 OR2D2Q9H210 308 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
RTN3-203ENST00000341307 CACNA1BQ00975 2339 aa9.76□□□□□ -0.85
RTN3-203ENST00000341307 IGKV1-27A0A075B6S5 117 aa9.76□□□□□ -0.85
RTN3-203ENST00000341307 CD300LBA8K4G0 201 aa9.76□□□□□ -0.85
RTN3-203ENST00000341307 WISP2O76076 250 aa9.76□□□□□ -0.85
RTN3-203ENST00000341307 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
RTN3-203ENST00000341307 FXYD3Q14802 87 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms