RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 OSR1Q8TAX0 266 aaPredicted RBP12.35□□□□□ -0.43
RRP1B-201ENST00000340648 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 FOXL2NBQ6ZUU3 175 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.35□□□□□ -0.43
RRP1B-201ENST00000340648 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
RRP1B-201ENST00000340648 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 PSMB2P49721 201 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 OR10J3Q5JRS4 329 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 MUC21Q5SSG8 566 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 PLXNB3Q9ULL4 1909 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 YPEL1O60688 119 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
RRP1B-201ENST00000340648 PAX9P55771 341 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 Q6ZS49 121 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 MGST2Q99735 147 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 FOXH1O75593 365 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 PFN1P07737 140 aaKnown RBP12.34□□□□□ -0.43
RRP1B-201ENST00000340648 OR9G1Q8NH87 305 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 C7orf71A4D174 169 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
RRP1B-201ENST00000340648 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 H3BVH4 76 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 BMI1P35226 326 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
RRP1B-201ENST00000340648 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 CYYR1Q96J86 154 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 DIRC2Q96SL1 478 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 A1L4Q6 167 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 UPK2O00526 184 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 FBLN7Q53RD9 439 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 KHDC1LQ5JSQ8 128 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 ZNF726P1Q15940 193 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
RRP1B-201ENST00000340648 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TM4SF20Q53R12 229 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 LRRK1Q38SD2 2015 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 IL4P05112 153 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 GLRXP35754 106 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 C2orf83Q53S99 150 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 GPR82Q96P67 336 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 DENND4CQ5VZ89 1909 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 A0A1B0GUT8 65 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 A0A1W2PRE2 83 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 LINC00473A8K010 186 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 POLR3KQ9Y2Y1 108 aaPredicted RBP12.32□□□□□ -0.44
RRP1B-201ENST00000340648 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 HERVK_113P61574 105 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 Q6P435 159 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 ZNF502Q8TBZ5 544 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
RRP1B-201ENST00000340648 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 FDCSPQ8NFU4 85 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 RBPMS2Q6ZRY4 209 aaKnown RBP12.31□□□□□ -0.44
RRP1B-201ENST00000340648 SNHG12Q9BXW3 62 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 C1RLQ9NZP8 487 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 S4R3C0 116 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 UNQ5815/PRO19632Q6UWF5 114 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
RRP1B-201ENST00000340648 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 WFDC3Q8IUB2 231 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 HIST1H4GQ99525 98 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 Q9H3A6 140 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
RRP1B-201ENST00000340648 NTF4P34130 210 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 RELQ04864 619 aaPredicted RBP12.3□□□□□ -0.44
RRP1B-201ENST00000340648 LYPD6BQ8NI32 183 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 C15orf62A8K5M9 175 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 B3GALT5-AS1P59052 145 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 FMC1Q96HJ9 113 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 CRIM1Q9NZV1 1036 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 ANOS1P23352 680 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 GFRA1P56159 465 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 LOC107984156A0A0G2JMH3 177 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 FOXC1Q12948 553 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
RRP1B-201ENST00000340648 ARL17AQ8IVW1 177 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 OR10W1Q8NGF6 305 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
RRP1B-201ENST00000340648 FRMPD3Q5JV73 1810 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms