RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 JMJD1CQ15652 2540 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 PAGE4O60829 102 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 RAB5AP20339 215 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 LOXL3P58215 753 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
C2orf88-201ENST00000340623 C11orf71Q6IPW1 123 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 BEX4Q9NWD9 120 aaPredicted RBP9.55□□□□□ -0.88
C2orf88-201ENST00000340623 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.88
C2orf88-201ENST00000340623 PF4V1P10720 104 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 SCGB2A2Q13296 93 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 C15orf54Q8N8G6 183 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 PPP1R14DQ9NXH3 145 aa9.55□□□□□ -0.88
C2orf88-201ENST00000340623 EREGO14944 169 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 NBR2O15453 112 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 IGKV1-5P01602 117 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
C2orf88-201ENST00000340623 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 H0YJW9 148 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 HSPB1P04792 205 aaKnown RBP9.54□□□□□ -0.88
C2orf88-201ENST00000340623 ETFRF1Q6IPR1 90 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 ACANP16112 2415 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 TRAV3A0A0B4J244 114 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 GNG7O60262 68 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
C2orf88-201ENST00000340623 PRR27Q6MZM9 219 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 ZNF343Q6P1L6 599 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 PPP1R27Q86WC6 154 aa9.54□□□□□ -0.88
C2orf88-201ENST00000340623 PPP5D1E7EU14 171 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 H3BUX3 64 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 ZFP36P26651 326 aaKnown RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 GPR61Q9BZJ8 451 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 GAR1Q9NY12 217 aaKnown RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 UPK2O00526 184 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 PHOX2AO14813 284 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 MYOD1P15172 320 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 MINOS1Q5TGZ0 78 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 Q71RC1 249 aaPredicted RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 SLC25A33Q9BSK2 321 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 LINC00527Q9UJ94 153 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 MINOS1-NBL1R4GNA1 71 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 COX7A2P2O60397 106 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 CDC34P49427 236 aaPredicted RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 ZNF585BQ52M93 769 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 Q6ZRM9 215 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 OR5B3Q8NH48 314 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 S4R3C0 116 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 MTORP42345 2549 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 ANKRD17O75179 2603 aaKnown RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
C2orf88-201ENST00000340623 PITX3O75364 302 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 ORM2P19652 201 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 ATP6V1FQ16864 119 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 Q6ZPA2 131 aa9.53□□□□□ -0.88
C2orf88-201ENST00000340623 MDFIC2A0A1B0GVS7 189 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 KRTAP10-9P60411 292 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 S100A7AQ86SG5 101 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 ZNF430Q9H8G1 570 aaPredicted RBP9.52□□□□□ -0.89
C2orf88-201ENST00000340623 HAX1O00165 279 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 CA2P00918 260 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 UBE2E1P51965 193 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 NUTF2P61970 127 aaKnown RBP9.52□□□□□ -0.89
C2orf88-201ENST00000340623 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 LRTM2Q8N967 370 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
C2orf88-201ENST00000340623 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
C2orf88-201ENST00000340623 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 NBEAQ8NFP9 2946 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 BEND2Q8NDZ0 799 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 C2orf88Q9BSF0 95 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 VSIRQ9H7M9 311 aa9.52□□□□□ -0.89
C2orf88-201ENST00000340623 LOC400499M0QZD8 3231 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 ITGB1BP1O14713 200 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 CD1BP29016 333 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 LYZP61626 148 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 TAF15Q92804 592 aaKnown RBP eCLIP9.51□□□□□ -0.89
C2orf88-201ENST00000340623 TPPP3Q9BW30 176 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 IGHV3-35A0A0C4DH35 117 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 C15orf61A6NNL5 157 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 ZNF705FA8MVS1 300 aaPredicted RBP9.51□□□□□ -0.89
C2orf88-201ENST00000340623 ZNF705DP0CH99 300 aaPredicted RBP9.51□□□□□ -0.89
C2orf88-201ENST00000340623 ZNF705BP0CI00 300 aaPredicted RBP9.51□□□□□ -0.89
C2orf88-201ENST00000340623 FABP4P15090 132 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 RND2P52198 227 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 MIC13Q5XKP0 118 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 COMMD1Q8N668 190 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 OR10W1Q8NGF6 305 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 IGHV1-69DA0A0B4J2H0 117 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 IGHV1-69P01742 117 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 NPSP0C0P6 89 aa9.51□□□□□ -0.89
C2orf88-201ENST00000340623 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms