RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CCL24O00175 119 aa11.9□□□□□ -0.5
SEC13-201ENST00000337354 WRBO00258 174 aa11.9□□□□□ -0.5
SEC13-201ENST00000337354 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
SEC13-201ENST00000337354 HSPB1P04792 205 aaKnown RBP11.9□□□□□ -0.5
SEC13-201ENST00000337354 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
SEC13-201ENST00000337354 OR5B12Q96R08 314 aa11.9□□□□□ -0.5
SEC13-201ENST00000337354 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
SEC13-201ENST00000337354 GOSR2O14653 212 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 IFNA10P01566 189 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 NPY1RP25929 384 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
SEC13-201ENST00000337354 IL15RAQ13261 267 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
SEC13-201ENST00000337354 PRR31Q5SQ13 230 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
SEC13-201ENST00000337354 DPF1Q92782 380 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
SEC13-201ENST00000337354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.88□□□□□ -0.51
SEC13-201ENST00000337354 PF4P02776 101 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 TAS2R30P59541 319 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 ZNF616Q08AN1 781 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 RAX2Q96IS3 184 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 NMES1Q9C002 83 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 GAR1Q9NY12 217 aaKnown RBP11.88□□□□□ -0.51
SEC13-201ENST00000337354 FBN3Q75N90 2809 aa11.88□□□□□ -0.51
SEC13-201ENST00000337354 LINC01619G3V211 115 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 I3L2K1 104 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 K7EIM0 57 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 SCGB1D2O95969 90 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 MT-CO2P00403 227 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
SEC13-201ENST00000337354 FCGR2BP31994 310 aaPredicted RBP11.87□□□□□ -0.51
SEC13-201ENST00000337354 RAB11AP62491 216 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 FHL3Q13643 280 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 SMIM8Q96KF7 97 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 TXN2Q99757 166 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 C21orf62Q9NYP8 219 aa11.87□□□□□ -0.51
SEC13-201ENST00000337354 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 TSPAN15O95858 294 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 CLEC3BP05452 202 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 IAPPP10997 89 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 ZP3P21754 424 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 MFAP4P55083 255 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 DEFA5Q01523 94 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 ETFRF1Q6IPR1 90 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
SEC13-201ENST00000337354 MED28Q9H204 178 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
SEC13-201ENST00000337354 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 SIX6O95475 246 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 IFNA4P05014 189 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
SEC13-201ENST00000337354 OPRK1P41145 380 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 DEFB136Q30KP8 78 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 TREML4Q6UXN2 200 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 CLEC19AQ6UXS0 136 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 ETV3LQ6ZN32 361 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 PSENENQ9NZ42 101 aa11.85□□□□□ -0.51
SEC13-201ENST00000337354 STRAPQ9Y3F4 350 aaKnown RBP11.85□□□□□ -0.51
SEC13-201ENST00000337354 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 A0A087WW49 117 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 K7EPK0 472 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 SSSCA1O60232 199 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 TSC22D2O75157 780 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
SEC13-201ENST00000337354 RLN2P04090 185 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 SLC25A4P12235 298 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
SEC13-201ENST00000337354 NPBWR1P48145 328 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 H2BFSP57053 126 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 SPSB3Q6PJ21 355 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 CACNG8Q8WXS5 425 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
SEC13-201ENST00000337354 CCDC140Q96MF4 163 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
SEC13-201ENST00000337354 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
SEC13-201ENST00000337354 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 L7N2F9 121 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 PAX9P55771 341 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 VAMP2P63027 116 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 RAB32Q13637 225 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 ASB13Q8WXK3 278 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
SEC13-201ENST00000337354 S4R3C0 116 aa11.83□□□□□ -0.52
SEC13-201ENST00000337354 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 TMEM50AO95807 157 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms